Streptococcus rubneri: LPB404_01165
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Entry
LPB404_01165 CDS
T09579
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
srun
Streptococcus rubneri
Pathway
srun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB404_01165 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_01165 (ruvB)
Enzymes [BR:
srun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB404_01165 (ruvB)
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB404_01165 (ruvB)
RecFOR pathway proteins
LPB404_01165 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
DUF815
Mg_chelatase
AAA_14
Rad17
AAA_3
nSTAND3
Sigma54_activat
AAA_16
ResIII
NB-ARC
RNA_helicase
NTPase_1
AAA_18
IstB_IS21
AAA_17
TsaE
bpMoxR
AAA_24
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QXW96879
LinkDB
All DBs
Position
237782..238780
Genome browser
AA seq
332 aa
AA seq
DB search
MSRILDNEIMGDEEAVERTLRPQYLHEYIGQDKVKDQLKIFIEAAKLRDEALDHVLLFGP
PGLGKTTMAFVIANELGVNLKQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVE
EVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEY
YEQDDLTEIVERTAEIFEMEITHEAAEELSLRSRGTPRIANRLLKRVRDFAQIMGDGLID
DTITDKALSMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEP
YLIQKGFIMRTRTGRVATRKAYEHLGYPYNGD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaattttagacaatgaaatcatgggcgatgaagaggctgttgaacggacgctg
cgcccgcaatatttacatgaatatatcggccaggataaggtcaaggaccagctgaaaatc
tttattgaagcggctaaacttcgagatgaagcgctggaccatgtccttctttttggccct
ccaggactggggaagactacgatggcctttgtcattgccaatgagctgggtgttaatctc
aagcagacttccggtcctgtcattgaaaaggctggtgacttggtagccatcctcaatgac
ctagagccgggtgatgttctctttatcgatgagatccaccgtctgcctatgtcagtcgaa
gaagtgctttacagtgccatggaggatttttacatcgatatcatgattggtgctggcgag
accagtcggagtgttcatctggacctccctcctttcaccttgattggggcgacgacccga
gcgggtatgctgtccaatcccttgcgcgctcgctttgggattacgggccatatggaatac
tacgagcaggatgatctgacagagattgtcgagcggaccgccgagatctttgagatggag
attacccatgaggctgctgaagagctttctcttcgtagtcgcgggacccctcggattgcc
aaccgcttgctcaaacgggtgcgcgattttgctcaaatcatgggcgatggcctgattgac
gacaccattactgataaagccctctccatgctagatgtggaccatgaaggattggattat
gtcgatcaaaagatcctgcgcaccatgatagagatgtacggaggaggcccagttggcctt
gggaccctatcggtcaatattgctgaagagcgggagactgtagaagacatgtatgaacct
tacttgattcagaaaggctttatcatgcggactcgtacagggcgcgtggcgacccgcaag
gcctatgaacacctaggctatccctacaatggagactag
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