Streptococcus rubneri: LPB404_03055
Help
Entry
LPB404_03055 CDS
T09579
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
srun
Streptococcus rubneri
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srun03019
]
LPB404_03055
03009 Ribosome biogenesis [BR:
srun03009
]
LPB404_03055
Enzymes [BR:
srun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPB404_03055
Messenger RNA biogenesis [BR:
srun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPB404_03055
Ribosome biogenesis [BR:
srun03009
]
Prokaryotic type
rRNA helicases
LPB404_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
XisI
AAA_30
NAT10_TcmA_helicase
SWI2_SNF2
PHD_like
Motif
Other DBs
NCBI-ProteinID:
QXW97209
LinkDB
All DBs
Position
607257..608600
Genome browser
AA seq
447 aa
AA seq
DB search
MKFTDFKFKDYIQEALKEINFIEATEVQEKLIPIVLAGRDLVGESKTGSGKTHTFLLPIF
QTLNEDSSNVEVVITAPSRELATQIYQAARQIASHCEKEIRIANYVGGTDKARQIDKLQV
AQPHIVIGTPGRIYDLVASGDLAIHKAHTFVVDEADMTLDMGFLTTVDKIASSLPKKLQF
LVFSATIPQKLQPFLKKYLSNPVMEQIKTKTVISDTIDNWLVSTKGRDKNEQVYQLTQAL
QPYLAMIFVNTKDRADDLHAFLVEKGIKVAKIHGGVPPRERKRIMNQVKNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL
GIQFFPKVLKAGAIEDTYDRDRRANREKRQEKLDIEMIGLVKKKKKKIKPGYKKKIKWAV
DEKRRKAKRAENRARGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagattttaagtttaaggactatatccaagaggccttaaaagagattaat
tttatcgaagcaacagaagttcaagaaaagctgatcccgattgttttagcaggccgtgat
ctggtcggtgaatctaaaacaggatcagggaagacccatactttcctcttaccaattttt
caaaccttaaatgaggatagtagcaatgtcgaagtggtcattacagcgcctagtcgggaa
ttggccacacagatttaccaagcggctcgtcagattgctagccattgtgaaaaagaaatt
cggattgccaactacgttgggggaactgataaggctcgtcaaatcgataagctccaagta
gcccaaccccatattgtcattgggacacctggacggatctatgatttggtcgcttctgga
gacttggctattcataaggctcacacttttgtggttgatgaggcggatatgactctcgat
atgggctttttgacgacggtagacaagattgcatccagtcttccaaagaagcttcagttt
ttagtcttctcagcaacgattccacaaaagttacaacccttcttgaagaaatatttgtct
aaccctgtcatggagcagatcaaaaccaaaacggtgatctcggacaccattgataactgg
ttggtatcgacaaaagggcgagataagaatgagcaagtctatcaactaacccaggctctt
caaccttatctagctatgatttttgtgaacaccaaggatagagcggacgatttgcatgct
tttctggtagagaaggggattaaggtcgctaaaatccatggaggggttcctccgcgggag
cgtaagcgcatcatgaaccaagtcaaaaacctggattttgaatatatcgtggcgacggac
ttggcagcgcgtggtattgatattgaaggggtcagtcatgtcatcaacgatgctattcca
caagacttatccttctttgttcaccgtgttggccggactggtcggaatggtcttcctggt
acagcgatcaccctctatcaaccgagtgatgactcagacattcgggagcttgaaaaatta
ggcatccagtttttccctaaggtcttgaaggctggagctatcgaggatacctatgaccgg
gaccgtcgggctaatcgtgaaaaacgccaagaaaaactcgatattgagatgatcggcttg
gtcaagaagaaaaagaaaaaaatcaaaccaggctacaagaaaaaaatcaaatgggctgtg
gacgagaaacgtcgtaaagctaagcgagctgagaatcgtgctcgtggtcgggcagaaaga
aaggccaaacgtcaaaccttttag
DBGET
integrated database retrieval system
