Streptococcus rubneri: LPB404_03625
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Entry
LPB404_03625 CDS
T09579
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
srun
Streptococcus rubneri
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srun03032
]
LPB404_03625
03036 Chromosome and associated proteins [BR:
srun03036
]
LPB404_03625
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_03625
DNA replication proteins [BR:
srun03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LPB404_03625
Chromosome and associated proteins [BR:
srun03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LPB404_03625
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LPB404_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-DNA_bdg
Rpf1_C
Ribosomal_L27_C
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QXW97306
LinkDB
All DBs
Position
710235..710510
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AA seq
91 aa
AA seq
DB search
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVSEYLSKGEKVQLIGFGNFEVRERAARK
GRNPQTGKEIKIAASKVPAFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaacaagatttgatcgcaaaagtggcagaagctacagaattgactaaaaaa
gactcagcagcagcagttgacgctgtatttgcagctgtttcagaatacctttcaaaaggt
gaaaaagttcaattgatcggtttcggtaacttcgaagttcgtgaacgtgcagctcgtaaa
ggtcgcaacccacaaactggtaaagaaatcaaaatcgctgcttctaaagttccagcattc
aaagctggtaaagctcttaaagacgcagttaaataa
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