Streptococcus rubneri: LPB404_04070
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Entry
LPB404_04070 CDS
T09579
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
srun
Streptococcus rubneri
Pathway
srun03030
DNA replication
srun03430
Mismatch repair
srun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB404_04070 (holA)
03430 Mismatch repair
LPB404_04070 (holA)
03440 Homologous recombination
LPB404_04070 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srun03032
]
LPB404_04070 (holA)
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_04070 (holA)
Enzymes [BR:
srun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB404_04070 (holA)
DNA replication proteins [BR:
srun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB404_04070 (holA)
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB404_04070 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF960
DUF438
Motif
Other DBs
NCBI-ProteinID:
QXW97597
LinkDB
All DBs
Position
791375..792412
Genome browser
AA seq
345 aa
AA seq
DB search
MQALQTIKKISAEKLPPILVLSGDDIGQFEWMKEQLLKKVGYDSSDLNCSYFDMKETAYS
EVELDLVSLPFFADEKIVILDHFVDVTTAKKRYLTDDELQSFEDYLSAPLETTRLIVFAE
GKLDSKRRIVKLLKRDAQLLEATELKEQELRAHFTEEIKSLGLAIDSQAFEQLLIKSGFD
FSEIQKNLEFLKRYKGSSSITISDIEEAIPKTLQDNLFDLIQMILKKQIDPARSLVKDLR
LQGEDEIKLLAILLSQFRVYTQVKLLKQEGRTESQIVSDLSELTGRKVNPYQVKFALRDS
RGISLSYLEQAICLLIDTDFQMKSGTYEKDYLFDLALLKLANPSV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctttacaaacaattaaaaaaatcagtgctgagaagcttcctcctatcctggtt
ctttcaggagacgacatcggtcagtttgagtggatgaaagagcaacttttaaagaaggta
ggctacgattcatctgatttgaactgttcctattttgacatgaaggaaacagcttattca
gaagttgagcttgacttggtcagcctcccattttttgcggatgaaaaaatcgtgatttta
gatcactttgttgatgtgacaactgcaaaaaaaagatacctgacggacgatgagttgcag
tcctttgaagattacttatcggctcctttagaaacgactcgcttaattgtttttgcggaa
ggaaaactggatagcaagcgaaggattgtcaagcttttaaaacgggatgcccagttgctg
gaggcaactgagttaaaggaacaagagttgcgtgcccattttacggaagagattaagtct
ctagggctagcgattgattcgcaagcattcgaacaacttttgatcaaatctggctttgat
tttagtgagatacagaaaaacttggagtttctaaaaaggtacaagggatcttctagcatt
accatctcagatattgaagaggctatcccgaagacattacaggataatctgtttgatcta
atccaaatgatcctaaaaaaacaaattgatccggcccgcagtttggtcaaggacctacgg
ttacaaggagaggacgaaatcaaactcttggccattttactgagtcaatttcgcgtctac
acacaggtcaagctcttgaagcaggagggacgaacagaatcccaaatcgtttcagatcta
tctgagctgaccggccgaaaagtgaatccctaccaagtcaagtttgctttaagggatagt
agaggtatttctctttcttatttggagcaggcgatttgtctcttgattgataccgacttt
caaatgaaatcgggaacttatgagaaagattatctatttgatttagctttactaaaactg
gccaatccatcggtgtaa
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