Streptococcus rubneri: LPB404_04760
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Entry
LPB404_04760 CDS
T09579
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
srun
Streptococcus rubneri
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_04760 (addA)
Enzymes [BR:
srun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB404_04760 (addA)
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LPB404_04760 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
DUF2059
AAA_7
AAA_22
KdpD
AAA_30
ResIII
AAA_16
AAA_25
YueH
DUF6448
Motif
Other DBs
NCBI-ProteinID:
QXW97522
LinkDB
All DBs
Position
940482..944159
Genome browser
AA seq
1225 aa
AA seq
DB search
MKPIEFLSPSQIQDLQVQEAQSDKEPKRTSEQIEAIYSSGTNILVSASAGSGKTFVMVQR
ILDQLHRGVSIQQLFISTFTVKAATELKERLEKELEKSLKATKDEELKHHLAQQIAELPT
SDIGTMDAFTQRLVSKYSYLLGLSPTFRVLQSASEQSLLKNDCFEQVFEQFYEEQGPERL
FSRLVKNFTGKGKSLAGFKDQVYALVDFLQSTADPLAWLEESFLKGYQDLDYDEALDQLA
REVKEQLFELESFLTFHLANEGQAFSGTKYQENVTAIQDLIASLNEKSSQEAIFEVLEQV
VLISRASGGRSLTITTRKEDLKELATAFNDERKERIEALRAAASQHYQLTYQIRFKDEPL
PLLVLLRDFVQAFSIAYLERKKQENTFEFGDISHFAIQILEEFPHIRSLYQERYQEVMVD
EYQDTNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNDKFKAYQEEGADGKLI
LLKENFRSHVEVLEATNHVFERLMDEEVGEILYDQSHRLIAGNPEKKEPTPAYETEFLLY
DGSQDAAETGEEEEQEGDGLSSGEVLLVIKEIIRLQNEEGVNFKDITLLTASRTRNDKVL
SAFEAYQIPIVADGGEENYLQSVEVMVLLDTLRTINNPLQDYPLVALMKSAMFEFDEDQL
ARLALQGVEGKKAENLYEKLQHALDQTGSAPQLIDSSLREKLTRFMETLDGWRDYAQTHS
LYDLLWKIYQDRHYYDYVGALPNGAQRQANLYALTLRANDFESSSFKGLPRFISMIDKIL
ENQHDLANVAQAVPKDAVQLMTIHKSKGLEFPYVFILNTDKKFVGKELSTNAVISRKNGV
GIKYIANLPVESDQEGLPEAVRLVIETLPYQRNVEEIRLAALSEQMRLLYVAMTRAERKL
YLVGKGRQDKLEERKWGASVNGRLSPALRKEINCFQDWLYAIQAVFAQQHLAYQTHFVSD
QDLTPEQIGHLELKTSLPVDDLKDNRQSEEIRRALDVLESVDRLNTQYQAAIQLPSVRTP
SQIKKFYEPIQDIEGVDLMEKVAVPLPSFEFPNFGKEEAVTGAAVGSALHELMQRIPLTT
VPTMESLTMVLQEVNASPAVKERIDLKKILAFFQTDLGQLLLKESGKVHREAPFAMLKTD
PTSGQDFVVRGILDGYLLLEDRILLFDYKTDRYRNPQDLLDRYQAQLELYAEALRRSYGI
DNIESYLILLGGEQLQVVSLADRKD
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattgaatttttaagtcctagtcagattcaagatctccaagtccaggaggcc
cagtctgataaggaaccaaagcggacatctgagcagatagaagccatctattcgtcagga
accaatatcctagtctcagcttcggccggttctgggaagacctttgtcatggtccaacgg
atcctggatcaattgcaccgaggggtttccatccagcaattgtttatctcaacctttacg
gtcaaggcggcaaccgagctcaaggaacgcttggaaaaggaattggagaaaagcctcaag
gctaccaaggacgaggagctcaagcaccacctggcccagcaaattgcagaattaccaact
agtgatatcgggaccatggatgccttcacgcagcgactggtctccaaatatagctattta
ttaggcctctcgccgactttccgtgtcctccaaagtgcaagtgagcagtccttactcaag
aatgactgcttcgagcaagtctttgagcagttttatgaggagcaagggcctgaacgcctc
tttagtcgcttggttaagaactttacaggaaagggcaagtcgctagcaggttttaaggac
caggtctacgccctagtagacttcttgcaatccactgcggatcctctcgcctggttggag
gagtccttcctcaaaggctatcaggatctggactatgatgaagccttggaccagttagcc
cgagaggtaaaagagcaactctttgaattagaatctttcttaaccttccatctggctaac
gaaggacaagcattttcagggaccaagtaccaagaaaatgtcaccgctattcaagacttg
attgctagtctcaatgagaaatctagccaggaagcgatttttgaggtcttggagcaggtg
gtcttgatctcccgtgccagcggcggacgaagtctgaccatcacgacacgaaaagaagac
ctgaaagagctagcgactgcctttaatgacgaacgcaaagaacgcattgaagccttgcgg
gcagcagcgtcccagcactaccaactaacctatcagattcgcttcaaggatgaacccttg
cctttgctagttttgctcagggattttgtccaagctttctcgattgcctatttggaacgc
aagaagcaggaaaatacctttgaatttggcgacatcagccattttgccatccagattctt
gaagaatttcctcatatccgcagtctctatcaggagcgctaccaagaggtcatggtcgat
gagtaccaggataccaaccacactcaagagcggatgttggagctcttgtccaatggccac
aaccgcttcatggtgggagatatcaagcagtctatctaccgcttccgtcaggctgatcct
cagatttttaatgacaagtttaaggcctatcaagaagaaggggcagatggcaaattgata
cttctcaaggagaatttccggagccatgtagaggtcttagaagcgaccaaccatgtcttt
gaacgtctcatggatgaggaagttggagagatcctctatgaccagagtcaccgcttaatt
gcgggcaatccggaaaagaaagagccgacgccagcttatgagacggagttcctgctctat
gatggtagtcaggacgcagctgaaacaggtgaagaagaggagcaagaaggggatggccta
tcctcaggtgaagtccttttggtcatcaaggagatcatccgcctccaaaatgaagaaggg
gtaaacttcaaagatattacgcttttgacggcttctcggacccgtaacgacaaggtgctt
tcagcctttgaagcctatcaaattcctatcgttgcggacgggggagaggaaaactacctc
cagtctgttgaggtcatggtcctcttggataccctccggaccattaacaatcccttacag
gactatcccttggtggccctcatgaaatcagccatgtttgaatttgacgaggaccagtta
gctcgcttagctttacagggagttgaaggcaagaaagcagaaaatctctatgagaaactg
cagcatgctttagaccagactggaagtgctcctcagttgatcgattcaagcttaagagag
aaactcactcgctttatggagacactggatggctggcgtgactatgcccagacgcattct
ctctatgacctgctttggaagatttaccaggatcgccactactatgattatgtgggtgcc
ctgccaaatggtgcccaacggcaggccaatctctatgccttgactcttcgggcaaatgac
ttcgaaagttctagtttcaagggattgcctcgctttatctccatgattgataagatcttg
gaaaaccagcacgacttggccaatgttgcccaggcagttcctaaggatgctgtccaactc
atgaccatccataagagcaagggacttgagttcccctatgtctttatcctcaacaccgat
aaaaagtttgtcggcaaagaactgtctaccaatgccgttatcagtcggaaaaatggggtg
ggcatcaagtatattgcgaatcttcctgtcgagtctgatcaagagggacttcctgaggcg
gttcgattggtcattgagaccctgccttaccagcgaaatgtcgaggaaattcgtctggca
gccttgtcggagcagatgcgtctcctctatgtcgctatgacccgggcagagcgtaagctt
tatcttgtcggtaagggccggcaggataagctagaagagagaaaatggggagccagtgtc
aatggacgcttgagcccagctcttcggaaggagatcaattgtttccaagactggctctat
gccattcaggcagtctttgcccagcaacacttagcctatcagactcattttgtgtccgac
caagacttgacgccggagcaaatcggtcacttggagttgaagacctccctcccagttgat
gacctgaaggacaaccgtcaatcagaagagattcgccgtgccttagatgtcttagaatct
gtggaccggctcaacacccagtaccaagcagctatccaactccctagtgtgcggacccca
agtcaaatcaaaaaattctatgaacctatccaagatatcgaaggagtggatctcatggaa
aaagtggccgttcccttaccaagctttgagtttccaaactttggcaaggaagaagctgtg
acaggggcagcagtcggtagtgctctgcatgaactgatgcaacgaattccattgacgaca
gttccaacgatggagagtttaacaatggttctccaagaggtcaatgccagcccagctgtc
aaggagcgaatcgacctcaagaagatcttagccttcttccagactgacttgggccaactc
ttgctcaaggagtctgggaaagtccatcgtgaagccccatttgctatgctcaagacggat
ccaaccagtggccaggactttgtagtccgggggatcttggacggctacctgcttctagaa
gatcggattcttctctttgactacaagacagaccgctaccgcaatcctcaggacttgcta
gatcgctaccaagcccaactggaactctacgcagaagccctccgccgctcgtatggtata
gacaacatcgaatcgtatttaatcttactaggaggcgagcaattgcaagtcgtttctcta
gcagatagaaaggattaa
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integrated database retrieval system
