Streptococcus rubneri: LPB404_04810
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Entry
LPB404_04810 CDS
T09579
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
srun
Streptococcus rubneri
Pathway
srun03410
Base excision repair
srun03430
Mismatch repair
srun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB404_04810 (recJ)
03430 Mismatch repair
LPB404_04810 (recJ)
03440 Homologous recombination
LPB404_04810 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_04810 (recJ)
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LPB404_04810 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPB404_04810 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LPB404_04810 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
AlaDh_PNT_C
Toprim
Motif
Other DBs
NCBI-ProteinID:
QXW97601
LinkDB
All DBs
Position
950592..952805
Genome browser
AA seq
737 aa
AA seq
DB search
MITSKYEWQFATPFSDDTFLAQAKKRGLEASAAKLLGERGIQTEEALDRFLEPRLEDLHD
PYLLHDMDKAVDRIRQAIEDYEQILVYGDYDADGMTAASIMKETLEQMGAEVAVYLPNRF
TDGYGPNASVYKYFIEQQGISLIITVDNGVAGHEAIDLAQSMGVDVIVTDHHAMPEVLPD
AYAIIHPEHPDADYPFKHLAGCGVAFKLACALLEEVPLDFLDLVAIGTIADMVSLTDENR
IFVKYGLGVFRQTQRIGLQEMLKLANITPQDVNEETVGFQIAPRLNALGRLDDPNPAVEL
LTGFDDEEALEIALMIQAKNEERKEIVQAIYDEAKAMVDPSLPVQILAKEGWNPGVLGIV
AGRLLEELHQPIVVLTIDQGKAKGSARSPESVHIFEALDPHHDLFIAFGGHAGAAGMTLE
VENLPRLTEFFSDYIREKGIDLTAKSPLFVDEELDLEELTLDTLKSFDRLAPFGMDHKKP
VFYIRDFQVESSRTMGAGNSHLKLKIQKGNARFDVVAFGQGHLELEFSQAKNLELVVSLS
INQWNGQTILQLMVVDARVEGVQLYNIRGKNAPLPQAIPLFSQLEGGVDSPAIVIDRIPD
DLADLKALFQEQSFQAVYFKNQLDKDYYLTGYGSRDQYAKLYKTLYQFPEFDIRHKLGQL
SDYLKIPQLLLIKMIQIFQELGFVQIENGIMTVNKDAEKKEITSSSIYQDLVQTVKDQEL
MALGSVQEIYEYLTESM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtcaaaatatgaatggcagtttgctacgcccttttcagatgatacgtttttg
gcgcaagcaaagaagagaggattagaagcatccgcagccaagttactgggagaaagaggg
atccagacggaagaagcgctggatcgttttctagaaccgcggctagaagatctccatgat
ccttacctgcttcacgatatggacaaggcagtggatcggatacgccaagctattgaagat
tatgaacaaatcctagtatatggggactatgatgcagacgggatgacggccgcttctatc
atgaaggaaaccttggagcagatgggggctgaagtagcggtctatctgcctaaccgtttt
acagatgggtatggtcccaatgccagtgtctacaagtattttatcgaacaacaggggatt
tccctcatcatcacggtggacaatggagtagctggacacgaagccattgacttggcccaa
agtatgggagtagatgtcattgtgacggatcaccatgccatgccagaagtcctaccggat
gcctatgccatcattcacccagagcatccagatgccgattatcccttcaaacacctagca
ggctgtggggttgcctttaagttggcctgtgccctcctagaagaggtgccgctagatttt
ctagacttggtagccattgggaccattgcggatatggtcagtttgacagatgaaaatcgc
atctttgtcaagtatggcctaggtgtctttcgtcaaactcaacggatcggcctccaggaa
atgctcaagttggccaacatcacccctcaagatgtgaatgaagaaacagttggttttcag
attgcccctcgtctcaatgcgctgggtcgcttggatgaccccaatccagcggttgaactc
ttgacaggatttgacgacgaagaagcgctagagattgcgctgatgattcaagccaagaac
gaagagcgcaaggagatcgtgcaagccatctatgatgaggccaaagctatggtcgatcca
agtcttcctgttcaaatcttggccaaggaaggttggaatcctggtgtcttagggatcgtg
gcaggtcgattgctagaagagctccatcagcctattgttgtcctgactattgaccaaggc
aaggcaaaaggaagtgcgcgaagccccgaaagtgtccatatttttgaagccctggatccc
catcatgatctctttatcgcctttggtggccatgcgggtgcagctgggatgactctggaa
gtggaaaatcttcctcgtctgactgagtttttttctgactatattcgtgaaaaagggatt
gacctgacggccaaatcccctctcttcgtagatgaggagttggacctagaagagctgacc
ttggacaccttgaagagctttgatcgtctagcaccttttggaatggaccataagaaacca
gtcttttacattcgagatttccaagtggagtctagccggaccatgggggcaggcaatagc
cacctgaagttgaagattcaaaaaggcaatgcccgctttgatgtcgttgcctttggtcag
gggcatttggaattggaattctcccaagcgaaaaatttggagttggtggtatccttgtcc
atcaatcaatggaatggacagactatcctacaactgatggtagtggatgcccgagtagaa
ggtgtgcaactttacaatatccgagggaagaatgcacctctcccacaagccatcccactc
tttagtcagttagaaggaggagtagattcccctgccattgtcatcgatcgcataccggat
gacctggctgacttgaaggccctcttccaagaacaaagcttccaagcggtctattttaag
aatcaactagacaaggactattatctgactggctacggtagccgggaccaatatgctaaa
ctctataagacactatatcagttccctgagtttgatatccgccataagctgggccaacta
tctgactacctcaagattccacagcttttgttgatcaagatgattcagattttccaagaa
ttgggctttgtccagattgaaaatggcatcatgactgtcaacaaggatgcggagaagaag
gagattacctctagttccatctatcaggacttggttcagacggtcaaagaccaagaactc
atggccctaggatctgtgcaagaaatttatgagtatttaacggaatcgatgtga
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