Streptococcus rubneri: LPB404_09365
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Entry
LPB404_09365 CDS
T09579
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
srun
Streptococcus rubneri
Pathway
srun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB404_09365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_09365
Enzymes [BR:
srun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LPB404_09365
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB404_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
DEAD
AAA_22
RsgA_GTPase
Herpes_Helicase
nSTAND3
UvrD_C
AAA_28
ORF6C
SLFN-g3_helicase
NPHP3_N
5_3_exonuc
T2SSE
ABC_tran
AAA
HTH_IclR
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QXW96611
LinkDB
All DBs
Position
1861692..1864127
Genome browser
AA seq
811 aa
AA seq
DB search
MEYYFSGTIERVIFENQSSFFRILLLDINDTDAEDYDDFEIIVTGTMADIVEGEDYTFWG
ELVHHLKYGQQLQMTRYERAKPTSKGLVKYFSSDHFKGIGLKTAQKIVDLYGEDTIDKIL
QAPEKLASISGLSRKNREAFVEKLQLNYGTERVLAQLANYGIPNKLAFQIQDFYKEETLQ
IVESAPYQLVEDIQGMGFKIADQLAEELGIASDAPERFRAGLVHSLLTLSLETGDTYVEA
KELLQATIQLLEASRPVELDPASIAQELAGLIEEDKVQNIDTKIFNNSLFFAEEGIRSHI
GRLLEKGKQESFELEKIEETIKQIEKELAIHYDPIQRKAIQEAIQQKVFVLTGGPGTGKT
TVINGIIGTYARLHQLDLGKKSQLPILLAAPTGRAARRMSELTGLPSATIHRHLGMTGDD
DTSHLDDYLDADFIIVDEFSMVDTWLANQLLSNISSNTKLLIVGDADQLPSVSPGQVLSD
LLQIPSIPQVKLEHIFRQSEDSTIVTLASQIRKGHLPPDFMEKKPDRSYFEAPSELIAPM
IEKITSAALRNGIPARDIQVLAPMYRGSAGIDQINSLMQELLNPLETDALFFQALDCQYR
NGDKVIHLVNDAESNVFNGDIGYITDLLPAKYTESKQDELTIQFDGNELVYPRNEWYKIR
LAYAMSIHKSQGSEFPVVILPLTNQSRRMLQRNLIYTAITRSKSKLILLGEYTAFHFATQ
NTGTARKTYLIERFSDVLPQRTDSSSQIPVHLEEPAKKTEPQSELVSVENHSDSSVSQPS
QQGYRLTEDNYLSIDPMIGLTEEEIQHFFKN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaatactatttctcaggaaccattgagcgagtcatttttgaaaatcaaagtagtttt
ttccgtatcttattgctggatatcaacgatacagatgcagaggactatgatgactttgaa
attatcgtcactggaacaatggcggatatcgtcgaaggagaagattataccttctgggga
gaactggtccatcatctgaaatatggccaacagttgcaaatgactcgctatgaacgagcc
aaacccactagcaaaggcttggttaaatacttttctagcgaccattttaaaggaattgga
ctcaaaaccgcccaaaagatcgtggatctctatggtgaggataccattgataaaatcctt
caagcacctgaaaagctggcctctatctccggactttctagaaagaatcgcgaggccttt
gttgaaaaactacagctcaactatggtacggaacgggtcctcgcccaacttgctaactat
ggcatccccaataaactagccttccaaatccaagatttctacaaggaagaaaccttgcaa
atcgtcgaatcggctccctatcaactggtcgaagatattcaaggaatgggctttaagatt
gccgaccaactagcagaagaattagggattgctagtgatgcacctgaacgtttccgagct
gggcttgtccatagtcttttgaccctctcattagaaacaggggacacctacgttgaagcc
aaagaattgctccaggccaccatccaactcttagaagcatcccggcccgtcgagctagat
ccagccagcattgcccaagaattggccggcctcatcgaagaagacaaggtgcaaaacatt
gacactaagattttcaacaacagcctcttctttgcagaagaagggatccgaagccatatc
ggtcgcctactagaaaaaggaaagcaagaatctttcgagctagaaaaaatcgaggaaacg
atcaaacagattgaaaaagagcttgctatccactacgatcccattcaacggaaggccatc
caggaggcgatccagcaaaaagtctttgtactaacaggtggaccaggaacaggaaagact
accgttatcaatgggattatcggaacctacgcccgcctgcaccaattggaccttgggaag
aaatctcaattaccaattctcttagctgctccaaccggtcgagcagcccgccgaatgagt
gaactaactggtctgcctagtgcaaccatccatcgccatttgggaatgacgggagacgac
gacacgagtcacctggacgattatttagatgctgacttcatcattgtcgatgaattttct
atggtggatacttggttagccaatcagcttctcagcaatatctcctccaataccaaactc
ttaattgttggtgatgccgatcaacttccttctgtgagtcctggacaagtcttgtctgat
ctcctacagatcccaagcatccctcaagtcaaactggaacacatcttccgtcaaagcgag
gactcgaccatcgtcactttggccagtcagattcgaaaaggtcacctgcctcctgacttc
atggagaaaaagcctgatcgttcctattttgaagcgccgagcgagctcatcgctcccatg
attgaaaaaatcaccagcgctgcccttcgcaacggcatcccggcccgggacatccaagtc
cttgctcctatgtatcgcggatctgcaggtattgatcaaataaacagcctcatgcaagag
cttctcaatccactagaaacagatgctctattctttcaagcgctggattgccagtatcga
aatggtgacaaggtcatccacctggtcaacgatgccgagagcaatgtctttaacggagat
attggctacatcacggacctcttaccggctaaatatactgaatccaagcaagatgaactc
accattcaattcgacggcaatgaattggtctacccacgcaatgaatggtacaagattcgc
ctggcctatgccatgagtatccataagtctcaggggagcgaattccctgtggtcattctt
cccttgaccaatcagagtcgacggatgcttcaacgaaatctgatctacacggccatcacc
cgttccaagagcaagctcatcctcctgggcgaatacactgcatttcactttgcgacacag
aatactggaactgcacgcaaaacctatctgattgaacgcttttctgatgtgcttcctcag
cgtacagactcttcttcacagatccctgtccatctggaagagcctgctaaaaaaacagag
ccccagagcgagctcgtctcagttgaaaaccactctgactcatctgtttcccaaccttct
caacaaggctaccgattaacagaagacaattacttaagcattgatcccatgatcggcctc
acagaggaagagattcaacatttcttcaaaaactag
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integrated database retrieval system
