Streptococcus rubneri: LPB404_09450
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Entry
LPB404_09450 CDS
T09579
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srun
Streptococcus rubneri
Pathway
srun03030
DNA replication
srun03430
Mismatch repair
srun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB404_09450
03430 Mismatch repair
LPB404_09450
03440 Homologous recombination
LPB404_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srun03032
]
LPB404_09450
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_09450
Enzymes [BR:
srun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB404_09450
DNA replication proteins [BR:
srun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB404_09450
DNA repair and recombination proteins [BR:
srun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB404_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QXW96627
LinkDB
All DBs
Position
1882496..1883089
Genome browser
AA seq
197 aa
AA seq
DB search
MKELSHYVSFDLEFNQFEGKYHIIQVSAVRFADGQEVAHYDSYAYTDKPLKSFINGLTGI
TSDKILQAPPLEQVLAEFRDFVADSPLIGYNAIKSDLPILAENGLEFTDQYAVDVFEEAS
KRRPSDLHGIKNLQLHTVAQFLGVAGKSHDSLEDARMTALVYEAFLESDRARQLLTEQES
FSTSPFGGLDLSNFFND
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaattaagccactatgtctcctttgatttagaatttaatcaatttgaaggaaag
taccacattatccaagtttctgctgtccgctttgcagatggccaagaagttgcccactat
gattcctatgcctatacggataaaccactaaagagctttatcaatggcctcaccgggatc
acatctgataaaatcctccaagctcccccactcgagcaagtcctagcggagttccgagat
tttgttgcagatagtcccctcattggatacaatgccatcaagagtgacctccctattcta
gcggaaaatgggctagagttcacagaccaatatgctgttgatgtctttgaagaagcttct
aaacgccgcccttctgacctccatgggattaaaaacttgcagctccatacagttgctcag
tttttaggagtagctggaaaatcgcatgatagtctagaagatgcccggatgactgctctt
gtttatgaagcctttctcgaatcagaccgggcccggcaactcctaaccgaacaagaatcc
ttttctacctctccttttggtggattggacctctccaatttttttaacgactaa
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