Streptomyces reticuli: TUE45_00119
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Entry
TUE45_00119 CDS
T04246
Symbol
sigF_1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_00119 (sigF_1)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_00119 (sigF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
MarR_2
HTH_23
HTH_37
HTH_3
HTH_Tnp_4
MarR
Trp_repressor
HTH_31
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CUW25409
LinkDB
All DBs
Position
I:196590..197435
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AA seq
281 aa
AA seq
DB search
MTTVTAAKTDTTASGLPEVAVPSQVTPKDARQLTRLFFDQLAVLEEGTSEYQYARNTLIE
MNMSLVRYAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFELAREVEFTSFAIPYIVGEIK
RFFRDTTWAVHVPRRLQEARVQLARATEELRSRLGRTPTVKELSELMSLPEDEVREARLA
SNGYSSSSLDATINGSEDGECALQDFIGTDDRALELVEDFHALAPMIAALDERDRHIIHM
RFVEELTQAQIGERLGVSQMHVSRLLSRCLARLREGMLTTR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtgactgcggcgaaaacggacacgaccgcgagtggtctgccggaggtcgcc
gttccctcccaggtgacaccgaaggacgcccgacagctgacgcgcctgttcttcgaccag
ctcgcggtccttgaggagggcacctccgagtaccagtacgcgcgcaacacgctgatcgag
atgaacatgtccctggtccgctacgcggccggccggttccgcagccgcggtccggaggag
atggaggatatcgtccaggtcggcatgatcggcttgatcaaggcgatcgaccggttcgag
ctcgcccgggaagtcgagttcacctccttcgccatcccttacatcgtcggcgagatcaag
cgcttcttccgcgacaccacctgggccgtgcacgtgccacgccgcctgcaggaggcgcgc
gtccagctggcccgcgccaccgaagagctgcgcagccgtctggggcgcacgccgacggtg
aaggaactgtcggagctgatgagcctgccggaggatgaggtgcgcgaggcccgcctggct
tccaacggctacagctcctcctccctggacgccacgatcaacggcagcgaggacggcgaa
tgtgccctgcaggacttcatcgggactgacgaccgggccctggagctcgtggaggacttc
cacgcactcgccccgatgatcgccgccctggatgaacgggatcggcacatcattcatatg
cggttcgtggaagaactcacccaggcacagatcggcgaacgcctgggcgtctctcagatg
cacgtttcccgcctcctctcgcgctgcctcgcccggctgcgcgaaggcatgctcaccacc
cgctga
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