Streptomyces reticuli: TUE45_00268
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Entry
TUE45_00268 CDS
T04246
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
srw
Streptomyces reticuli
Pathway
srw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TUE45_00268 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srw02000
]
TUE45_00268 (lsrB)
Transporters [BR:
srw02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
TUE45_00268 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
CUW25558
LinkDB
All DBs
Position
I:360077..361156
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AA seq
359 aa
AA seq
DB search
MLKPNLRRACAALAAGTSLALALTGCGGTTKDDVKADNASAASAGKADPNAATKKGLTVG
FLPKQVNNPYFTTAGKGGEKALAELGSTYKEVGPSSATDTSGQVSYVNTLTQQQVDAMAV
SAQDPGALCTALKQAMRNGIKVVTYDSDTSPGCRDAFVSQAGAEDLGRTEVQLLAEQIGY
KGEIAILSAAQTATNQNTWIDYMKDELKDPKYQDIELVEIAYGNDDAQQSFQQTQGLLQE
HPDLKGIISPTTVGIKAAAQYLSGSTYKGKVKLTGLGTPNDMRRYVKNGTVEAFELWDPA
RLGDLAARTAVALASGQITGKEGETFKAGATTYTIGKDGVINLGRPTVFDAGNIDRFDF
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagccgaacctccgccgcgcctgtgccgccctcgccgccggcacctccctcgcc
ctcgccctcaccggctgcggcggcaccaccaaggacgacgtgaaggccgacaacgcctcc
gccgcctccgccggcaaggccgacccgaacgccgccaccaagaaggggctgaccgtgggc
ttcctgcccaagcaggtcaacaacccctacttcaccaccgccggcaagggcggggagaag
gcgctcgccgaactcggttcgacctacaaggaggtggggccgagcagcgccacggacacc
tccggacaggtgagttacgtcaacacgctcacccagcagcaggtggacgccatggccgtc
tccgcgcaggaccccggcgccctgtgcaccgcgctgaagcaggccatgcgcaacgggatc
aaggtcgtgacctacgactccgacaccagccccggctgccgcgacgccttcgtctcgcag
gccggcgcggaggacctggggcgcaccgaggtgcagctgctcgcggagcagatcggctac
aagggcgagatcgcgatcctgtcggccgcgcagaccgcgaccaaccagaacacgtggatc
gactacatgaaggacgagctgaaggaccccaagtaccaggacatcgagctggtcgagatc
gcctacggcaacgacgacgcccagcagtccttccagcagacccagggcctgctccaggag
caccccgacctgaaggggatcatctccccgaccaccgtcggcatcaaggccgccgcccag
tacctgtcgggctccacgtacaagggcaaggtcaagctgaccgggctcggcacgccgaac
gacatgcgcaggtacgtcaagaacggcacggtcgaggccttcgagctgtgggacccggcg
agactcggcgacctcgccgcacggaccgcggtcgcgctggcctcgggtcagatcaccggc
aaggagggcgagaccttcaaggccggcgccacgacgtacaccatcggcaaggacggcgtg
atcaacctgggcaggccgaccgtgttcgacgccggcaacatcgaccggttcgacttctga
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