Streptomyces reticuli: TUE45_00869
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Entry
TUE45_00869 CDS
T04246
Symbol
sigF_2
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_00869 (sigF_2)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_00869 (sigF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_37
HTH_3
HTH_31
GerE
DUF7343
HTH_Crp_2
Sigma70_ECF
HTH_28
HTH_26
Motif
Other DBs
NCBI-ProteinID:
CUW26158
LinkDB
All DBs
Position
I:1070721..1071614
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AA seq
297 aa
AA seq
DB search
MGAGIAGRPGVLSMVRAHLPRCLSIQHLLREVRAMRVTGSTKPHPHDDAPDTGDSFERLA
QLPEGPERQALRDELIQLWLPMAERIAVRFRGRGEALEDLYQVAALGLVKAVDHYDPGRG
RAFEAYAVPTITGEIKRHFRDHMWTLHVPRRVQDLRNRVRTATKELAQTTPGRAPTVAEI
AAYTRLSEDEVRAGMEALECFSALSLDAEVAGTDGYALGDSLGGPDPGFDLVVDRAAVKP
CLAALPERERTILYLRFFRGMTQSRIAQQLGISQMHVSRLLSGCFDRLREELLAEAR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgggagccggcatcgccggacgccccggtgtcctttccatggtccgagcgcacctccca
cggtgtctgtccatccagcacctgctgagagaggtgcgcgcgatgcgtgtcactggcagc
accaagccccatccccatgacgacgccccggacaccggagactccttcgagcggctcgca
cagctgccggaggggcccgagcggcaggcgctcagggacgagctgatccaactgtggctc
cccatggccgagcggatcgccgtgcggttccgcggccgtggcgaggccctggaggacctg
tatcaggtggccgcactgggcctggtcaaggccgtcgaccactacgaccccggccgcggc
cgtgccttcgaggcgtacgcggtgcccaccatcaccggggagatcaagcgtcacttccgg
gaccacatgtggaccctgcacgtgccgcgccgggtgcaggacctgcgcaaccgggtccgc
accgccacgaaggagctggcgcagaccacgccgggccgggcgcccaccgtcgccgagatc
gccgcgtacacgcggctcagcgaggacgaggtgcgcgccggcatggaggcgctggagtgc
ttctccgcgctgtccctggatgccgaggtggccggcacggacggctacgccctcggcgac
tccctgggcggaccggacccgggattcgacctcgtggtggaccgggccgcggtcaagccc
tgcctcgcggcactgcccgagcgcgaacggaccatcctctacctgcgattcttccgcggc
atgacgcagagccggatcgcccagcagctcggcatctcgcagatgcacgtctcgcggctg
ctcagcggctgcttcgaccggctgcgcgaggagctgctggcggaggcccgctga
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