Streptomyces reticuli: TUE45_00888
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Entry
TUE45_00888 CDS
T04246
Symbol
sigF_3
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_00888 (sigF_3)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_00888 (sigF_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
MarR_2
KORA
DUF7343
HTH_24
DUF4423
MarR
NirdL-like_HTH
HTH_3
Sigma70_ECF
DUF6757
DUF134
GerE
Motif
Other DBs
NCBI-ProteinID:
CUW26177
LinkDB
All DBs
Position
I:complement(1094125..1094976)
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AA seq
283 aa
AA seq
DB search
MLTDMSTSRPGTTATSAAAPTRRSHDDAPDTAELFARLAELDEGPERDAVRDELVTAWLP
MAHRIAGRFRDRGESVEDLRQVAALGLVKAIDRFDPSRGAFESYAVPTITGEVKRHFRDR
MWALRVPRRVQELRNRVRVARRELTQNPGSPEPTVADIAAHTGLTEEEVTAGLEALESFS
TLSLDAELSAGDDGYSLADTLGAADNSYDVVVDREAAKEGLRRLPERERAILYMRFFEDM
TQSRIADRLGISQMHVSRLISRSCARVRDEVLGSRRPGGSDQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgacatgtcgacaagccgtcccggcacgaccgccacgtccgccgctgccccc
acccggcgcagccacgacgacgcccccgacaccgcggagctgttcgcccggctggcggaa
ctggacgagggccccgagcgggacgccgtacgcgacgaactcgtcaccgcctggctgccc
atggcgcaccggatcgccggccggttccgcgaccggggcgagtccgtcgaggatctgcgc
caggtggcggccctcggcctggtgaaggccatcgaccgcttcgacccctcccgcggggcc
ttcgagagctacgccgtcccgaccatcaccggagaggtcaagcggcacttccgcgaccgg
atgtgggcgctcagggtgccgcgccgggtgcaggaactgcgcaaccgggtgcgggtcgcc
cggcgggagctcacccagaaccccggcagccccgaacccaccgtcgccgacatcgccgcc
cacaccggcctcaccgaggaggaggtgaccgccggcctggaggcgctggagagcttcagc
accctctcgctggacgccgaactgtccgccggcgacgacggctacagcctcgccgacacc
ctcggcgcggcggacaactcctacgacgtcgtggtcgaccgcgaggccgccaaggagggg
ctgcgccggctgcccgaacgcgagcgggccatcctctacatgcggttcttcgaggacatg
acgcagagccgcatcgccgaccggctcggcatctcccagatgcacgtctcccggctgatc
agccgcagctgcgcccgcgtgcgcgacgaggtgctcggcagccgccgccccggcggcagc
gaccagcggtga
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