Streptomyces reticuli: TUE45_00938
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Entry
TUE45_00938 CDS
T04246
Symbol
sigF_4
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_00938 (sigF_4)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_00938 (sigF_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_38
HTH_Crp_2
MarR
Sigma70_ECF
HTH_27
MarR_2
GerE
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
CUW26227
LinkDB
All DBs
Position
I:1145872..1146762
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AA seq
296 aa
AA seq
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MNTAAGIRSQAEVVEQTEQDGTGERSLPGIADPASVAPRDARELSRQFFHRLAELEEGTH
EYQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELARGVEFTSF
ALPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELSSRLDRDPTVAELATLMNLS
EDEVVEAQLASNGYNSASLDAALTGDGPEDGEAVLADFIGVEEEGLRLVEDFHALAPLMA
ELSDRDRQIIHLRFVEEATQAEIGERLGCSQMHVSRLIKRIITRLRQGMLGELGCA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgccgccgggatccggtcgcaagcagaggtcgtcgagcagaccgagcaggac
gggacgggcgagaggtcactgcctggcatcgcggacccggcgtcggtcgccccgcgggac
gcacgggagctgtcccgccagttcttccaccggctggccgagctggaggaaggcacgcac
gagtaccagtacgcgcgcaacaccctcatcgagatgaacatgtcgctggtgcggttcgcg
gccggacgcttccggggccgtggcgacgacatggaggacatcgtccagaccggcatgatc
ggcctgatcaaggcgatcgaccggttcgaactggcgcgcggagtcgagttcacctccttc
gcgctgccgtacatcgtcggcgagatcaagcggttcttccgggacaccacgtgggccgtc
catgtgccgcgccggctccaggagctgcgcgtggagctggccaaggcccgtgaggagctg
tccagccgactggaccgggatcccacggtcgccgagctggccacgctgatgaacctctcc
gaggacgaggtggtcgaggcccagctcgcctccaacggctacaactccgcctctctcgac
gccgcgctcaccggcgacggccccgaggacggcgaggcggtgctcgccgacttcatcggt
gtggaggaggaggggctccggctcgtcgaggacttccacgcgctcgccccgctgatggcg
gagctgagcgaccgagaccggcagatcatccatctgaggttcgtcgaggaggcgacccag
gcggagatcggggagcggctcgggtgctcccagatgcacgtctcccgcctcatcaagcgg
atcatcacccggctgcggcaggggatgctgggcgagctgggctgcgcctga
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