Streptomyces reticuli: TUE45_02920
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Entry
TUE45_02920 CDS
T04246
Symbol
ykoD
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srw02000
]
TUE45_02920 (ykoD)
Transporters [BR:
srw02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
TUE45_02920 (ykoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_16
RsgA_GTPase
AAA_25
nSTAND1
MMR_HSR1
AAA_18
SbcC_Walker_B
AAA_22
AAA_23
AAA_27
AAA_30
NACHT
ATP-synt_ab
Rad17
MeaB
Motif
Other DBs
NCBI-ProteinID:
CUW28190
LinkDB
All DBs
Position
I:3387545..3389245
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AA seq
566 aa
AA seq
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MIRFEDVSVTYEGAAGPTVTGVDFEVPEGELVLLAGPSGVGKSTVLGAVSGLVPHFTGGT
LRGRVTVAGRDTRTHPPRQLADVVGTVGQDPLAHFVTDTVEDELAYGMESLGLAPEVMRR
RVEETLDLLGLAGLRDRPIAALSGGQRQRVAIGSVLTPHPRVLVLDEPTSALDPAAAEEV
LAVLQRLVHDLGTTVLMAEHRLERVIQYADQVVLLPAPGAAPVVGAPADVMAVSPVHPPV
VALGRLAGWSPLPLTVRDARRRATPLRDRLATRTATAAAPRRRGQAAPPPAGTGTGRRSF
FRRRPSPAPAAAAAPHPPVAETRSLSLRRDRVQALRRIDLTVTRGETIALMGRNGAGKST
LLGSLVGLLAPTAGTVTVGGLTPHRTRPEDLVRQVGLVPQDPRDLLYTDTVAAECAAADR
DAGAAPGTCRSLVSGLLPGIADDTHPRDLSEGQCLALALAVVLTARPPLLLLDEPTRGLD
YAAKARLVDVLRELAAEGHAIVLATHDVELAAELAHRVVLLAEGEVIADGPTADIVVSSP
SFAPQVTKILAPQRWLTVAEVREALA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcttcgaggatgtcagcgtgacgtacgagggtgccgccggacccaccgtcacc
ggtgtggacttcgaggttcccgagggtgaactcgtgctgctcgccggtccgtccggggtc
ggcaagtcgaccgtgctgggcgcggtcagcgggctcgtcccgcacttcaccggcggcacc
ctgcgcggacgcgtcacggtggccggccgggacacccgtacccacccgccgcggcaactg
gccgacgtggtcggcacggtgggccaggacccgctcgcgcacttcgtgacggacaccgtg
gaggacgaactcgcctacggcatggagtcgctgggcctcgccccggaggtgatgcggcgc
cgggtcgaggagaccctcgacctgctgggcctggccgggctgcgggaccgcccgatcgcc
gccctctccggcgggcagcggcaacgggtcgcgatcggctcggtcctcaccccgcacccg
cgggtcctggtcctggacgagccgacctcggcgctggacccggccgccgcggaagaggtg
ctcgccgtgctgcaacggctggtgcacgacctggggacgacggtcctgatggccgaacac
cgcctggagcgggtgatccagtacgccgaccaggtcgtcctgctgcccgcgccgggtgcc
gcgccggtcgtgggcgccccggcggacgtcatggccgtctcgccggtccaccccccggtg
gtcgccctcggccgcctggccggctggtccccgctccccctgaccgtccgggacgcccgc
cgccgcgccacgccgctgcgcgaccgcctggccacccggacggccaccgcggcggcaccc
cgccggcgcgggcaggcggccccgcccccggccggcaccggtaccgggcgccgctccttc
ttccgccgccgcccctccccggcccccgccgccgccgccgccccgcacccgcccgtcgcc
gagacccgctccctctccctccgccgcgaccgcgtccaggccctgcgccgcatcgacctg
accgtgacccggggcgagacgatcgccctgatgggccgcaacggcgccggcaagtccacc
ctgctcggctcactcgtcggcctgctggcgcccaccgccggaaccgtcaccgtcggcggg
ctcaccccccaccgcacccggcccgaggacctcgtacgccaggtcggcctcgtcccgcag
gacccgcgcgacctgctgtacacggacacggtcgccgccgagtgcgcggcggccgaccgg
gacgcgggtgccgcgcccggtacctgccggtcgctggtgtccgggctgctgccgggcatc
gcggacgacacgcacccccgggatctgtcggagggccagtgcctggcgctcgcgctggcc
gtggtgctgaccgcccgcccgcccctgctcctgctggacgagccgacccgtggcctggac
tacgcggccaaggcccgcctggtcgacgtactgcgcgagctggcggccgaggggcacgcg
atcgtcctggccacgcacgacgtggagctggccgccgagctggcgcaccgggtggtgctg
ctcgccgagggcgaggtgatcgccgacggcccgacggccgacatcgtggtgtcctccccg
tccttcgctccgcaggtgacgaagatcctggccccgcagcggtggctgacggtggccgag
gtcagggaggccctcgcgtga
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