Streptomyces reticuli: TUE45_03062
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Entry
TUE45_03062 CDS
T04246
Symbol
hrdA
Name
(GenBank) RNA polymerase principal sigma factor HrdA
KO
K03086
RNA polymerase primary sigma factor
Organism
srw
Streptomyces reticuli
Pathway
srw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TUE45_03062 (hrdA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_03062 (hrdA)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_03062 (hrdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
CUW28328
LinkDB
All DBs
Position
I:complement(3548472..3549584)
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AA seq
370 aa
AA seq
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MQTQTLTQTDSSTSATGITADEPDVLVAVPPQSRAALHPETEPPADALADEPEEPVEAPV
AARAESGGPSADLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLGSTPDLDSQLA
LDLDRLVVMGRVAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYA
RGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPDE
VAAHLDLPPERVGEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLKE
HLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHA
FADQLRGYLD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctcacccagaccgacagcagcaccagcgccaccggcatcaccgcg
gacgagccggacgtcctcgtggccgtacccccgcagagccgtgccgccctgcatccggag
acggagccgcccgccgacgcgctcgcggacgagcccgaggaacccgtcgaggccccggtc
gccgcccgggccgagtccggcggtccgtccgccgacctgttccgccagtacctgcgtgag
atcggccgcattccgctgctcaccgccgccgaggaggtggaactcgcccgccgggtggag
gccggcctgttcgcggaggagaagctgggcagcacccccgacctggacagccagctggcg
ctcgacctggaccggctcgtcgtcatgggccgggtggccaagcgccggctcatcgaggcg
aacctgcggctcgtcgtctccgtggccaagcggtacgtcggccgcggcctgaccatgctc
gacctggtccaggagggcaacctcgggctgatccgggccgtggagaagttcgactacgcg
cgcggctacaagttctccacctacgccacctggtggatccggcaggccatgtcccgggcg
ctggccgaccaggcccgcaccatccgcgtcccggtccacgtggtggagctgatcaaccgg
gtcgtccgcgtccagcggcggatgctccaggaacgcggctacgagccgacaccggacgag
gtcgccgcccacctggacctgccgcccgagcgggtcggcgaggtgctgcgcctcgcccag
gagccggtgtcgctgcacgccccggtcggcgaggaggacgacgtcgccctcggcgacctc
atcgaggacggcgacgcggcgagccccgtcgagtccgccgcgttcctcctgctcaaggag
cacctggaggccgtcctgtccacgctcggggaacgcgagcggaaggtcgtccagctccgg
tacgggctggccgacggccgcccccgcacgctggaggagatcggccgcatcttcggcgtg
acccgcgagcggatacggcagatcgagtccaagacgctgaacaagctcagggaccacgcg
ttcgcggaccagctgaggggctatctggactga
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