Streptomyces reticuli: TUE45_03352
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Entry
TUE45_03352 CDS
T04246
Symbol
recD2_2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
srw
Streptomyces reticuli
Pathway
srw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUE45_03352 (recD2_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srw03400
]
TUE45_03352 (recD2_2)
Enzymes [BR:
srw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TUE45_03352 (recD2_2)
DNA repair and recombination proteins [BR:
srw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUE45_03352 (recD2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
Helicase_RecD
AAA_16
NPHP3_N
PhoH
nSTAND3
TraI_hel_assoc_N
DEAD
AAA
ABC_tran
UvrD-helicase
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CUW28627
LinkDB
All DBs
Position
I:complement(3887501..3889756)
Genome browser
AA seq
751 aa
AA seq
DB search
MAGQAGTQTGERRLAVVEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
LDTLRIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDESISVVKEQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSADQ
GHCFLPEERLIADAVKLLQVDTGLVIECLAELGQVPEDGADPGVVREKVPGPDGGGDEPV
SAVYLVPFHRAELSLSAQLLRLLRTDQDRMPGFREVDWGKALGWLRTRTGADLAPEQEAA
VKLALTEKVAVLTGGPGCGKSFTVRSIVELARARRAKVLLAAPTGRAAKRLSELTGAEAS
TVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVD
QLPSVGAGEVLRDLLAEKSPIPAVRLTRVFRQAQQSGVVTNAHRINAGQHPLTDGLKDFF
LFVEDDTEAAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGALNGLLQQAITP
GRPDLPEKRFGGRVFRVGDKVTQIRNNYEKGKNGVFNGTVGVVTSLDPVDQRLTVLTDED
EEVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRARRLV
VLVGSRRAIGQAVRTVSAGRRCTALDFRLRA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggctggacaggcggggacccagaccggtgagcggcggcttgccgtggtcgaaggggtg
ctggagcggatcacgtacgccaatgaggagaacgggtacaccgtggcccgggtcgacacc
ggcagaggcgccggcgatctgctcacggtggtcggcgcgctcctcggtgcgcaggtcgga
gagtccctgcggatggagggccgctgggggtcgcacccgcagtacggcaagcagttccac
gtcgagaactacacgaccgtcctgcccgccaccgtccagggcatccgccgctacctcggc
tccggcctggtcaagggcatcgggccggtcttcgccgatcggatcacccagcacttcggg
ctggacaccctgcggatcatcgaggaggagccgaagcggctgatcgaggtgcccggcctc
gggccgaagcggacgaagaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctgcagaccgtcgaggtctccacctccatcgccgtgcggatctacaag
aagtacggggacgagtccatctccgtcgtcaaggagcagccgtaccggctcgccgccgat
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccgcac
gacagtcccgagagggtgaaggccgggctgcagtacgcgctctcgcagtccgccgatcag
gggcactgcttcctcccggaggagcggctgatcgccgatgccgtgaagctgctccaggtg
gacacggggctggtcatcgagtgtctcgccgagctgggccaggtgccggaggacggggcc
gatccgggggtcgtacgggagaaggtgcccgggcccgacggcggcggcgacgagcccgtc
agcgccgtctacctcgtgcccttccaccgcgccgaactctccctctccgcccagctgctg
cggctgctgcgcacggaccaggaccggatgccggggttccgggaggtggactgggggaag
gcgctcggctggctgagaacccgcaccggcgccgacctcgcacccgagcaggaggccgcc
gtgaagctcgcgctgaccgagaaggtcgccgtcctcacgggcgggccggggtgcgggaag
tccttcaccgtccgctcgatcgtggagctggcccgcgcccggcgtgccaaggtgctgctg
gccgccccgaccggccgggccgccaagcggctctcggagctgaccggagccgaagcctcc
accgtgcaccggctgctggaactgaagccgggcggggacgcggcctacgaccgggaccgg
ccgctcgacgccgacctggtggtcgtggacgaggcgtccatgctggacctgctgctcgcc
aacaagctggtcaaggccgtaccgccgggggcgcacctgctgttcgtgggggacgtggac
cagttgccgagcgtcggcgccggggaggtcctgcgggacctgctcgccgagaagagcccg
atcccggccgtccggctcacccgggtcttccggcaggcccagcagtccggtgtcgtcacc
aacgcgcaccggatcaacgcggggcagcatccgctcaccgacgggctgaaggacttcttc
ctcttcgtggaggacgacaccgaggccgcgggccggctgaccgtggacgtggccgcacgg
cggattccggccaagttcggcctcgacccgcgccgggatgtgcaggtgctcgcgccgatg
caccggggaccggccggcgcgggcgcgctcaacgggctgctccagcaggccatcacgccc
gggcggcccgatctgccggagaagcggttcggcggccgggtcttccgcgtcggcgacaag
gtcacccagattcgcaacaattatgagaaagggaagaacggtgtcttcaacggcaccgtg
ggcgtcgtcacctcgctcgatccggtcgatcagcgcctgaccgtactgacggacgaggat
gaggaggttccgtacgaattcgacgaactggacgaactggcgcacgcgtacgcggtgacc
atccaccgctcgcagggcagtgagtatcccgccgtggtgattccggtcaccacgggagca
tggatgatgctccagcggaacctgctctacacggcggtcacccgggcccggcgcctggtc
gtcctcgtcggttcccgcagggcgatcgggcaggcggtgcgcacggtgtcggccgggcgg
cggtgcacggccctggacttcagactgcgcgcctga
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