Streptomyces reticuli: TUE45_03409
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Entry
TUE45_03409 CDS
T04246
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
srw
Streptomyces reticuli
Pathway
srw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TUE45_03409 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srw03019
]
TUE45_03409 (orn)
03009 Ribosome biogenesis [BR:
srw03009
]
TUE45_03409 (orn)
Messenger RNA biogenesis [BR:
srw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TUE45_03409 (orn)
Ribosome biogenesis [BR:
srw03009
]
Eukaryotic type
Pre-60S particles
RNases
TUE45_03409 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CUW28690
LinkDB
All DBs
Position
I:3956380..3956982
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AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPARALETMPEVVR
QMHTASGLLAELESGTTLQDAEEQVLAYVREHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTAKSIAAKHVLPAQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gctctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtgctgggcgaaggg
gtggacatcgtcatccgcccgccggcccgcgcgctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccgggctgctcgccgagctggagagcggtacgaccctccaggac
gccgaggagcaggtcctcgcctatgtccgggagcacgtgaaggagcccggcaaggccccg
ctgtgcggcaactccgtcggcaccgaccgcggcttcctgctgcgcgacatgccgaccctg
gaggactacctccactaccggatcgtcgacgtgtcctcgatcaaggagctggcccgccgc
tggtacccgcgggcgtacttcaacagcccggagaagaacggcaaccaccgggccctcgcc
gacatccgcgagtcgatcgccgagctgcgctactaccgcgaggccatcttcgtgccgcag
cccggccccgactccgacaccgcgaagtcgatcgccgccaagcacgtcctgcccgcgcag
tag
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