Streptomyces reticuli: TUE45_03695
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Entry
TUE45_03695 CDS
T04246
Symbol
sigF_6
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_03695 (sigF_6)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_03695 (sigF_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
CUW28962
LinkDB
All DBs
Position
I:4275201..4276142
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AA seq
313 aa
AA seq
DB search
MSADQGSSKVLTPTMSEAAPKELDALDVLDGFEGVTALEAVPSPAEGPAAEAVPAAQATA
NIDTRTLSRSLFLRLAALGEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQV
GTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKAS
DELSQKLDRSPTVTELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRL
GYEDSALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLT
RTLAQLRDGLISD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctgacgcccacgatgagcgaggcagcgccc
aaggagctcgacgctctcgacgtcctcgacggcttcgagggtgtcacggccctcgaagcc
gtgccgtccccggccgaaggcccggccgccgaagctgtcccggccgcgcaggccacggcg
aacatcgacacccgcaccctgtcccgctcgctgttcctgcgcctggccgcgctgggcgag
gacagccccgagcgggcctacgtgcgggacaccctgatcgagctgaacctgccgctggtc
cgctacgcggcggcgcgtttccgctcccgcaacgagccgatggaggacatcgtccaggtc
ggcaccatcggcctgatcaaggcgatcgaccggttcgactgcgaacggggcgtggagttc
ccgacgttcgcgatgccgacggtcgtgggcgagatcaagcggttcttccgggacacctcg
tggtccgtgcgtgtcccgcgccggctccaggaactgcgcctggcgctcaccaaggccagc
gacgagctgtcgcagaagctggaccgctcccccacggtgaccgagctggccgccgtgctc
ggcgtctccgaggaggacgtggtcgacggcctcgcggtcggcaacgcctacaccgcctcc
tccctcgactcgccggcccccgaggacgacggcggcgagggttccctggccgaccggctc
ggctacgaggactcggccctggagggcgtggagtaccgcgagtccctcaagcccctgctg
gccaaactcccgccccgggagcggcggatcatcatgctccgcttcttcgccaacatgacg
cagtcacagatcggcgaggaggtcggcatctcccagatgcacgtctcccgcctgctgacc
cggacgctggcgcagctgcgggacggtctgatctcggactga
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