Streptomyces reticuli: TUE45_03929
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Entry
TUE45_03929 CDS
T04246
Symbol
pel_3
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
srw
Streptomyces reticuli
Pathway
srw00040
Pentose and glucuronate interconversions
srw01100
Metabolic pathways
srw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TUE45_03929 (pel_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUE45_03929 (pel_3)
Enzymes [BR:
srw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TUE45_03929 (pel_3)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Chon_Sulph_att
Motif
Other DBs
NCBI-ProteinID:
CUW29195
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All DBs
Position
I:4530209..4531552
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AA seq
447 aa
AA seq
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MAAPSHRRSLRKRRTLAVSAAVVAAGVGAGVFVMNANADGVDLYHQTLAAKDGWAASGTG
TTGGAKADSAHTFTVSTRAQLVKALGSASDTTPRIIKVKGTIDANTDDSGRKLTCADYAS
GTGYSLPAYLKAYDPATYGRSKLPSGTQEKARAAAQDRQAKNIVFKVPANTSIVGVPGTD
AGITGGMLQIQNVDNVIVRNLTFSATEDCFPQWDPTDGDDGNWNSAYDSVSLRGATHVWA
DHNTFTDAPHFDKANPTYFGREYQIHDGALDITKGSDLVTVERNRFTDHDKTMLIGSSDK
DSTGKLRVSIHHNVWKGIVQRAPLARLGQIHLYNNVYDTTTVNGYAPQYSINSRAKAQVV
AEANHWTVPSGGKVAKLLSGDGTGSVAGSGNLVNGTVTDLVAAYNAASSKKIGTTVNWKP
TLTAGLQASAKNLPAELASTTGAGVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggcagctccctcccaccgccggtccctccgcaagcggcgcaccctcgccgtgtccgcc
gccgtcgtggccgcgggtgtcggtgccggggtgttcgtgatgaacgcgaacgccgacggc
gtcgacctgtaccaccagaccctcgccgccaaggacggctgggccgcctccggcacgggg
accaccggcggcgcgaaggccgactccgcgcacaccttcaccgtctccacccgggcccag
ctcgtgaaggcgctgggttcggcctccgacaccacgccccgcatcatcaaggtcaagggc
acgatcgacgccaacaccgacgacagcggcagaaagctgacctgcgccgactacgcgtcc
ggcaccggctactcgctgccggcctacctcaaggcctacgacccggccacctacggccgc
tccaagctgccctccggcacccaggagaaggcccgcgccgccgcccaggacaggcaggcg
aagaacatcgtgttcaaggtgccggccaacaccagcatcgtgggcgtgcccggcaccgac
gccgggatcaccggcggcatgctccagatccagaacgtggacaacgtcatcgtccgcaac
ctgaccttctccgccaccgaggactgcttcccgcagtgggacccgaccgacggcgacgac
ggcaactggaactccgcctacgactcggtgagcctgcgcggagcgacccacgtctgggcg
gaccacaacacgttcaccgacgcgccgcacttcgacaaggcgaacccgacgtacttcggc
cgcgagtaccagatccacgacggcgccctcgacatcaccaagggctccgacctggtgacc
gtcgaacgcaaccggttcaccgaccacgacaagacgatgctgatcggcagcagcgacaag
gacagcaccggcaagctgcgcgtctcgatccaccacaacgtgtggaagggcatcgtccag
cgggccccgctggcccgcctcggccagatccacctctacaacaacgtgtacgacacgacg
accgtcaacggctacgcgccccagtacagcatcaactcccgtgcgaaggcccaggtcgtg
gcggaggccaaccactggacggtgccgtccggcggcaaggtcgccaagctgctcagcggc
gacggcacgggctccgtcgcgggcagcggcaacctggtcaacggcacggtgaccgacctg
gtcgccgcctacaacgccgcgtcgtcgaagaagatcgggacgacggtgaactggaagccg
accctcaccgcgggcctccaggcgtcggcgaagaacctgccggcggaactggcgagcacg
accggcgccggcgtgctgaagtaa
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