Streptomyces reticuli: TUE45_04199
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Entry
TUE45_04199 CDS
T04246
Name
(GenBank) hypothetical protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
srw
Streptomyces reticuli
Pathway
srw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TUE45_04199
09124 Replication and repair
03420 Nucleotide excision repair
TUE45_04199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_04199
03400 DNA repair and recombination proteins [BR:
srw03400
]
TUE45_04199
Enzymes [BR:
srw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUE45_04199
Transcription machinery [BR:
srw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TUE45_04199
DNA repair and recombination proteins [BR:
srw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TUE45_04199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
YflT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CUW29490
LinkDB
All DBs
Position
I:complement(4819529..4821184)
Genome browser
AA seq
551 aa
AA seq
DB search
MPRVNGPLIVQSDKTLLLEVDHERADDCRRAIAPFAELERAPEHIHTYRVTPLGLWNARA
AGHDAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLTKHPAHGLVLTTTDRPVLEE
VLKSKRIAPLVGARIDPDTVAVHPSERGQIKQMLLKLGWPAEDLAGYVDGEAHPIELLED
GWALRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWK
HELVKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLIVYD
EVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYI
APADCVEVRVNLTDSERLAYATAEAEEKYRFCATTETKRKVTEAIVRRFAGQQILVIGQY
IDQLDELGEHLNAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQ
VSGTFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRI
VDADEILAEGR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgcgtgaatggtccgctgatcgtccagtccgacaagaccctgctcctggaagtc
gaccacgagcgggccgacgactgccgtcgggcgatcgcgcccttcgccgagctggagcgg
gcgcccgagcacatccacacctaccgggtcaccccgctcggcctgtggaacgcgcgcgcc
gccgggcacgacgccgagcaggtcgtcgacgccctggtgcagtacagccgctaccccgtc
ccgcacgcgctgctcgtggacatcgccgagacgatggaccgctacggccgcctcaccctg
accaagcaccccgcgcacggactcgtcctcaccaccaccgaccgcccggtgctggaggag
gtgctgaagtccaagcggatcgccccgctggtcggcgcccggatcgatccggacaccgtg
gccgtgcacccctccgagcgggggcagatcaagcagatgctgctgaagctgggctggccg
gccgaggacctcgccgggtacgtcgacggcgaggcgcacccgatcgagctgctggaggac
ggctgggcgctgcgtccctaccagaagcaggccgtggagaacttctggcacggcggcagc
ggcgtcgtcgtcctgccctgcggcgccgggaagaccctggtcggcgccgggtccatggcc
caggcgaagtcgaccacgctgatcctcgtcaccaacaccgtctccgcccggcagtggaag
cacgagctggtgaagcggacctcgctgacggaggacgagatcggcgagtacagcggtacg
aagaaggagatccgcccggtcaccatcgccacctaccaggtgctgacgaccaagcggaag
ggcgtctacccgcacctggagctgttcgactcccgggactggggcctgatcgtctacgac
gaggtgcacctgctgcccgcgcccgtgttcaagttcaccgccgacctccaggcgcggcgg
cggctggggctcacggccaccctggtgcgcgaggacggccgtgagtcggacgtgttctcc
ctcatcgggcccaagaggttcgacgccccgtggaaggagatcgaggcgcagggctacatc
gcgcccgccgactgcgtcgaggtccgggtgaacctcaccgactccgagcggctggcgtac
gccaccgccgaggcggaggagaagtaccgcttctgcgcgaccaccgagaccaagcggaag
gtcaccgaggcgatcgtccgccggttcgccgggcagcagatcctcgtcatcggccagtac
atcgaccagctggacgagctgggcgagcacctgaacgccccggtgatcaagggcgagacc
tccaacgcgcagcgcgagaagctcttcgacgcgttccgcgagggcgagatcagcgtgctg
gtggtgtcgaaggtcgccaacttctccatcgacctgccggaggccacggtcgccatccag
gtgtccggcaccttcggctcccggcaggaggaggcccagcggctcggccgggtgctgcgc
cccaaggccgacggccaccaggcgcacttctactcggtcgtcgcccgcgacaccatcgac
caggacttcgccgcccaccggcagcggttcctggcggagcaggggtacgcctaccggatc
gtggacgcggacgagatcctggccgagggccgctaa
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