Streptomyces reticuli: TUE45_04690
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Entry
TUE45_04690 CDS
T04246
Symbol
pelA_2
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
srw
Streptomyces reticuli
Pathway
srw00040
Pentose and glucuronate interconversions
srw01100
Metabolic pathways
srw02020
Two-component system
srw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TUE45_04690 (pelA_2)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUE45_04690 (pelA_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUE45_04690 (pelA_2)
Enzymes [BR:
srw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
TUE45_04690 (pelA_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TUE45_04690 (pelA_2)
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
CUW29974
LinkDB
All DBs
Position
I:complement(5324635..5326680)
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AA seq
681 aa
AA seq
DB search
MSRPTPRHRRSRTAFAFGLPLALAAGALGYGFLAPGAQPRAAAATAVPAWATATADGFAS
VNALGQNGTYGGRGGEIVTVKTLADLEKYATAEKPYIIVVAAAITMDPVGKEIRVRSDKT
IIGSGTSGQIVGGGFFLGPGVHNVIIRNLTIRDAYQGVWNDKEHDYDGIQMDGAHHVWID
HNDIRHMADGLIDSRKDTTYLTVSWNRLGQENKAFGIGWTENTTADITVHHNWIRETEQR
NPSTDNVAHAHLYNNYLQDEPGTAIRASYGTYARGRTSMLLENSYFEGLADPVIKDGTAT
LVQRGNVFSGTGGRNESGGTGAAWDPKSFYGYTLDKAADVPSVVTSGAGPRGSLGTTATA
RAAATTLTVAKDGSGQYTTVQAAVNAVPANNPSRVVIAVKPGTYRETVKVPANKPHVTIQ
GTGASRKDTLIVYDNAAGTRKPDGSGTYGTGGSATVAVEADDFQARNLSISNDFDEGAHQ
DIAQQAVALRTAADKVFLDGVIVSGDQDTLLLDTAAKDRLGRVYLTNSYVTGNVDFVFGR
ATAVLDKSVITLKKRWDGTSAGYVTAPSTAAGRKGFLIVNSSVTGGVSDRSFYLGRPWHA
GGDATLDPQTTVRNTSLSAAIRTAPWTDMSGFSWKDDRFAEYRNTGAGAGAAGPDRPQLT
DAQAADQEIADWLGDWKPTAS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccccaccccccgccaccgcaggagccgtaccgcgttcgcgttcgggctgccg
ctcgcgctcgccgccggcgccctcggctacggcttcctcgcccccggcgcccagccgcgg
gccgccgccgccaccgccgtaccggcctgggccacggccaccgccgacgggttcgcctcg
gtgaacgcgctcgggcagaacggtacgtacggcgggcgcggcggcgagatcgtcaccgtg
aagaccctcgccgacctggagaagtacgccaccgccgagaagccgtacatcatcgtcgtg
gccgcggcgatcacgatggacccggtcggcaaggagatcagggtccgctcggacaagacc
atcatcggctccggcacctcggggcagatcgtcggcggcggcttcttcctcggcccgggc
gtccacaacgtgatcatccggaacctgaccatccgggacgcgtaccagggcgtctggaac
gacaaggagcacgactacgacggcatccagatggacggcgcccaccatgtgtggatcgac
cacaacgacatccggcacatggccgacggcctcatcgacagccgcaaggacaccacgtac
ctgaccgtctcctggaaccggctcggccaggagaacaaggcgttcggcatcggctggacc
gagaacaccaccgccgacatcacggtccaccacaactggatccgcgagaccgagcagcgc
aacccgtccacggacaacgtcgcccacgcgcacctgtacaacaactacctccaggacgag
ccgggtacggcgatcagggcctcgtacggcacctacgcccgcggcaggaccagcatgctg
ctggagaactcgtacttcgagggcctggccgacccggtgatcaaggacggcaccgccacc
ctggtccagcgcggcaacgtcttctccggcaccggcggccggaacgagagcgggggcacg
ggcgccgcctgggacccgaagagcttctacggctacaccctcgacaaggcggccgacgtg
ccgtcggtcgtcacgtccggcgccggaccgcgcggttccctgggcacgacggccaccgcc
agggccgccgcgaccaccctcaccgtcgccaaggacggctcggggcagtacacgaccgtg
caggccgcggtgaacgccgtacccgcgaacaacccctcccgggtcgtcatcgcggtgaag
cccggcacctaccgggagaccgtcaaggtcccggcgaacaagccgcacgtcaccatccag
ggcaccggcgccagccgcaaggacacgctgatcgtctacgacaacgcggccggcacccgc
aagcccgacggttcggggacgtacggcaccggcggcagcgccaccgtcgccgtggaggcc
gacgacttccaggcccgcaacctcagcatctccaacgacttcgacgagggcgcccaccag
gacatcgcccagcaggccgtcgccctgcgcacggccgccgacaaggtgttcctggacggg
gtcatcgtcagcggcgaccaggacacgctgctgctcgacaccgccgccaaggaccggctc
ggccgcgtctacctgaccaactcctacgtcaccggcaacgtcgacttcgtcttcgggcgg
gccaccgccgtcctcgacaagtcggtcatcaccctgaagaaacgctgggacggcacctcc
gccggctatgtcacggcccccagcaccgcggccggccgcaagggcttcctgatcgtcaac
tcgtccgtgaccggcggcgtctccgaccgctccttctacctgggccggccctggcacgcg
ggcggcgacgccaccctcgacccgcagaccaccgtccgcaacacgtcgttgagcgccgcg
atcaggaccgctccgtggaccgacatgagcggcttctcctggaaggacgaccggttcgcc
gagtaccggaacaccggggcgggcgcgggggcggccggccccgaccggccgcagctgacc
gacgcgcaggccgcggaccaggagatcgcggactggctgggcgactggaagccgaccgcc
tcctga
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