Streptomyces reticuli: TUE45_04854
Help
Entry
TUE45_04854 CDS
T04246
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srw03032
]
TUE45_04854 (topA)
03400 DNA repair and recombination proteins [BR:
srw03400
]
TUE45_04854 (topA)
Enzymes [BR:
srw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TUE45_04854 (topA)
DNA replication proteins [BR:
srw03032
]
Prokaryotic type
DNA Topoisomerases
TUE45_04854 (topA)
DNA repair and recombination proteins [BR:
srw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TUE45_04854 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CUW30135
LinkDB
All DBs
Position
I:5479843..5482677
Genome browser
AA seq
944 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYTVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHEFQPIYVINADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDSSDPSSLVARLQTVD
GRRIAQGRDFDSVGQLKSANILHLDEATARALAAALENTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQIAQKLYENGYITYMRTDSTTLSDTAIAAARAQVTQLYGA
EYLPATPRVYAAKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
AEGDALSAEEITADGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIAAGEAQAVPWLKRFYFGEGH
DGVGSAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNGIVLRVGRYGPYIERGEK
DTEQHQRADIPDDLAPDELSVELAEELLAKPSGDFELGTDPATGHTIVAKDGRYGPYVTE
VLPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALRLMSLPRVVGTDADGVEITAQNGR
YGPYLKKGTDSRSLQSEDQIFTITLEEAQAIYAQPKQRGRAAAKPPLKELGADPVSGKPV
VVKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKGPAKKTAKKAAAKKTA
PAKKTAAKKTAAKKTTAAAKKTTAKKTTAKKATASKATASDTED
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggtcgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggctacaccgtcgaggcgagcgtc
gggcacatccgcgaccttcccaacggcgccgcggaggtgccggagaagtacaccggcgag
gtccgtcgcctcggtgtggacgtcgaacatgaattccagccgatctatgtgatcaacgcc
gacaagaaggcccaggtcaagaagctcaaggacctgctgaaggactccgacgagctgttc
ctcgccaccgatgaggaccgggagggcgaggcgatcgcctggcacctccaggaggtcctg
aagccgaagatcccggtcaagcgcatggtgttccacgagatcaccaaggacgcgatccgg
gaggccgtcgccaacccgcgccagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtctccccggtgctgtggaagaaggtcatg
ccccggctgtcggccggccgcgtgcagtccgtcgccacccgactcgtcgtggagcgggaa
cgcgagcggatcgcctttcgttccgccgagtactgggacctgacggggaccttcgcgacc
ggccgcgcgggagactcgtcggacccgtcgtcgctggtcgcccgcctccagaccgtcgac
ggccggcggatcgcgcagggccgcgacttcgactccgtgggacagctcaagagcgcgaac
atccttcacctcgacgaggcgaccgcgcgcgccctcgccgccgccctggagaacacccgc
ttctccgtgcggtccgtcgagtccaagccgtaccgccgctcgccgtacgccccgttccgt
acgacgacgctgcagcaggaggccagccgcaagctcggcttcggcgcgaaggcgaccatg
cagatcgcgcagaagctgtacgagaacggctacatcacgtacatgcgtacggactccacg
acgctgagcgacacggcgatcgccgcggctcgcgcccaggtcacgcagctgtacggcgcc
gagtacctgccggccaccccgcgcgtctacgccgccaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgtccctcgggtgatcgtttccgcacgcccgcggagaccggtctgacc
ggggaccagttcaagctgtacgagctgatctggaagcggaccgtcgcgtcccagatgaag
gacgcgaccggcaacagcgtcacggtgaagatcggcggcacggctgccgacggccgggac
gtcgagttcagcgcctccggcaagacgatcaccttccacggcttcctgaaggcctacgtc
gagggtgccgacgacccgaacgccgagctggacgaccgcgagcgccggctgccgcaggtc
gccgagggggacgcgctgtccgccgaggagatcacggccgacggccacgccaccaagccc
ccggcccggtacaccgaggccagcctggtcaaggagctggaagagcgggagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctggaccgcggctacgtcttcaagaag
ggcacggccctcgtgccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gccgcgggtgaggcccaggccgtgccgtggctgaagcgcttctacttcggcgagggccac
gacggcgtcggcagcgccgccgaggccggcaacggcgacggggaccacctcggcggtctc
aaggagctggtgaccgacctgggcgcgatcgacgcgcgcgaggtgtcgtcgttcccggtg
ggcaacggcatcgtgctgcgggtcggccgctacggcccgtacatcgagcgcggcgagaag
gacaccgagcagcaccagcgcgccgacatcccggacgacctggcgccggacgagctgagc
gtcgagctggccgaggagctgctggccaagcccagcggcgacttcgagctgggcaccgac
ccggccaccggccacacgatcgtggccaaggacggccgctacggcccgtacgtcacggag
gtgctccccgagggcaccccgaagaccggcaagaacgcggtcaagccgcggacggcctcg
ctcttcaagtcgatgtcgctcgacacggtgacgctcgaggacgcgctgcggctgatgtcg
ctgccgcgggtcgtcggcaccgacgccgacggggtggagatcaccgcgcagaacggccgg
tacggcccctatctgaagaagggcacggactcgcgctcgctgcagtccgaggaccagatc
ttcacgatcacgctggaggaggcgcaggcgatctacgcccagccgaagcagcgtggccgg
gccgccgccaagccgccgctgaaggaactgggcgcggacccggtctccggcaagccggtc
gtggtcaaggacggccgcttcggcccgtacgtcaccgacggcgagacgaacgcgaccctc
cgctccggcgacagtgtcgaaacgatcactccggagcgtggcttcgagctgctcgccgag
aagcgggcgaagggccccgccaagaagacggcgaagaaggcggcggccaagaagaccgcc
ccggcgaagaagaccgcggccaagaagacggccgcgaagaagacgacggccgccgcgaag
aagacgaccgccaagaagaccaccgcgaagaaggcgacggcttccaaggcgacggcttcc
gacacggaggactga
DBGET
integrated database retrieval system
