Streptomyces reticuli: TUE45_05970
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Entry
TUE45_05970 CDS
T04246
Symbol
ddpA_6
Name
(GenBank) putative D,D-dipeptide-binding periplasmic protein DdpA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
srw
Streptomyces reticuli
Pathway
srw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUE45_05970 (ddpA_6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srw02000
]
TUE45_05970 (ddpA_6)
Transporters [BR:
srw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TUE45_05970 (ddpA_6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CUW31232
LinkDB
All DBs
Position
I:6697812..6699563
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AA seq
583 aa
AA seq
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MRRSALAAIAAIGSASLLLSGCSKADDNKNENGTKSAGANAATKGVVNVSDKKGGTVTYE
MSDVPDSFDPGNTYYAYMYNLSRLWARPLMTFKPGPGDEGNTLVPDLAASKGVPSDGGKT
WTYKLRSGLEYEDGTPITSKDVKYAVERSNFARDVLSLGPNYFQQFLAGGDKYKGPYKDK
SDKGLSSIETPDDTTIVFHLKQPFQEFDYLVAAPQTAPVPKAKDKGVDYVKNIVSSGSYK
FQSYEDGKQAVLVRNENWDPKTDPLRKQLPDKIVVNLKVNPEKIDQDVLAGNAIDLAGTG
VQASTQADVLTDPAKKANTDNTYGGRLVYMALNTKVKPFDKIECRKAVQYAIDKVSVQTA
EGGPIRGEVASTVLPPDIPGYAKSDAYATKGSKGDVAKAKEQLKACGKTSISTNISARSD
RPQEIDAATAIINSLKKVGINATLKQYPSGKYFTDYAGVPKFTEKQNIGLIMMQWGADWP
SGYGFLQQILNGKAISQSGNTNLAQYDNKEVNDLLAKAIGTQDAGERNSLYTQIDKKTMD
DAVLVPLTYFKVLLGRPTNYTNLVSTAAFSGQYDYLNIGVASK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaggtcagcgctggccgcgatcgcggccatcggctccgccagcctgcttctttcg
ggctgcagcaaggccgatgacaacaagaacgagaacggcaccaagtcggccggggccaac
gccgcgaccaagggcgtcgtgaacgtgtccgacaagaagggcggcacggtcacctacgag
atgtccgacgtgccggactccttcgacccgggcaacacgtactacgcgtacatgtacaac
ctcagccggctgtgggcccgcccgctgatgacgttcaagcccggccccggcgacgagggc
aacaccctggtcccggacctcgcggcgagcaagggcgtcccgagcgacggcggcaagacc
tggacgtacaagctgcggtccggcctggagtacgaggacggcacgccgatcacctcgaag
gacgtcaagtacgccgtcgagcgctcgaacttcgcgcgtgacgtgctctccctcggcccg
aactacttccagcagttcctggccggcggcgacaagtacaagggcccgtacaaggacaag
agcgacaagggcctgtcctccatcgagacgccggacgacaccaccatcgtcttccacctg
aagcagccgttccaggagttcgactacctggtcgccgccccccagacggctccggtgccc
aaggccaaggacaagggcgtcgactacgtcaagaacatcgtgtcctcgggctcgtacaag
ttccagagctacgaggacggcaagcaggccgtcctggtgcgcaacgagaactgggacccg
aagaccgacccgctgcgcaagcagctgccggacaagatcgtcgtcaacctgaaggtcaac
ccggagaagatcgaccaggacgtcctcgcgggcaacgcgatcgacctggccggcaccggt
gtccaggcctccacccaggccgacgtgctcaccgaccccgccaagaaggccaacacggac
aacacctacggtggccgcctggtctacatggcgctcaacaccaaggtgaagccgttcgac
aagatcgagtgccgcaaggccgtccagtacgcgatcgacaaggtctcggtgcagaccgcc
gagggcggcccgatccgcggtgaggtcgcctccaccgtcctgccgccggacatcccgggc
tacgcgaagtccgacgcctacgcgaccaagggcagcaagggcgacgtcgccaaggccaag
gagcagctgaaggcctgcggcaagacctcgatctcgaccaacatctcggcccgctcggac
cgcccgcaggagatcgacgccgccacggcgatcatcaactcgctgaagaaggtcggcatc
aacgccaccctcaagcagtacccgtccggcaagtacttcaccgactacgcgggcgtgccg
aagttcaccgagaagcagaacatcggcctgatcatgatgcagtggggtgccgactggccc
tccggctacggcttcctccagcagatcctgaacggcaaggcgatcagccagtccggtaac
accaacctggcgcagtacgacaacaaggaagtcaacgacctgctggccaaggcgatcggt
acgcaggacgcaggcgagcgcaacagcctctacacgcagatcgacaagaagaccatggac
gacgccgtcctcgtcccgctgacctacttcaaggtcctgctgggccgcccgacgaactac
accaacctggtttccacggcggcgttcagcggtcagtacgactacctcaacatcggcgtc
gcgtcgaagtag
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