Streptomyces reticuli: TUE45_06249
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Entry
TUE45_06249 CDS
T04246
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srw03009
]
TUE45_06249 (rimO)
Enzymes [BR:
srw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TUE45_06249 (rimO)
Ribosome biogenesis [BR:
srw03009
]
Prokaryotic type
ribosomal protein modification factors
TUE45_06249 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CUW31501
LinkDB
All DBs
Position
I:7035600..7037072
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AA seq
490 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKSHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLQTIL
SGGIHASHTPRDRRKLLPISPAERQESAASVALPGHGPADLPEGVAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPDVLRSMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGETESDLAELERFLN
GARLDAIGVFGYSDEEGTEAATYDNKLDEDVVAERLAHISRLAEELVSQRAEERVGETVR
VLVESVDEEEGVHGRGAHQAPETDGQVLLTSGAGLSVGRMVEAKVVGTEGVDLVAEPLTG
SLACSEEAGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactctcggctgcgctcgtaacgaggtggat
tccgaggagctcgcaggccgtttggaggcggacggctggcagctcgtcgaggacgccgcg
gacgccgacgtcgccgtggtcaacacctgtggcttcgtggaggccgccaagaaggactcc
gtcgacgccctgctggaggccaacgacctcaagagccacgggagaacccaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctggccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactacacggacatctccgaccgcctccagaccatcctg
tccggcggcatccacgcctcccacaccccgcgggaccggcgcaagctgctgccgatcagc
ccggccgagcgccaggagtcggccgcatcggtcgcgctgcccgggcacggccccgccgat
ctccccgagggcgtcgcgcccgcctccggcccccgcgcgccgctgcgccgccggctggac
ggctccccggtcgcctcggtcaagctggcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcccgccgccccagcgacgtcctcaacgag
acccgctggctggccgaacagggcgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtccctgctgccggagctggcc
gaggtcgacggcatcgagcgggtgcgggtgagctacctccagccggccgagatgcgcccg
ggcctcatcgacgtcctgacctccaccccgaaggtcgccccgtacttcgacctgtccttc
cagcactccgcgcccgacgtgctgcgctccatgcgccgcttcggcgacaccgaccggttc
ctggagctgctcgacacgatccggagcaaggcgcccgaggccggcgtgcgctccaacttc
atcgtcggcttccccggcgagaccgagtccgacctggccgaactggagcgcttcctgaac
ggcgcccggctcgacgcgatcggcgtcttcggctactccgacgaggagggcacggaagcg
gcgacgtacgacaacaagctggacgaggacgtcgtcgccgagcgcctggcccacatctcc
cggctcgccgaggagctcgtctcgcagcgcgccgaggagcgcgtcggtgagaccgtgcgg
gtcctggtggagtccgtggacgaggaggagggcgtccacggccgcggcgcccaccaggcc
ccggagaccgacggccaggtgctgctcacgagcggcgcgggcctgagcgtcggacgtatg
gtcgaggcgaaggtggtcggtacggagggtgtcgacctggtggccgagccgctgaccggc
tcgctcgcgtgtagtgaggaggcgggcagatga
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