Streptomyces reticuli: TUE45_06635
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Entry
TUE45_06635 CDS
T04246
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srw03016
]
TUE45_06635 (rnd)
Enzymes [BR:
srw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TUE45_06635 (rnd)
Transfer RNA biogenesis [BR:
srw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TUE45_06635 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
CUW31886
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All DBs
Position
I:complement(7482775..7483983)
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AA seq
402 aa
AA seq
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MLGAPTPLLEPREGIPPVVADEAGLARVIAAFAAGSGPVAVDAERASGYRYGQRAYLVQL
RRQGAGTALIDPVACPDLSGLGEALSGVEWVLHAATQDLPCLREIGMVPTRLFDTELAGR
LAGFPRVGLGAMVEGVLGFVLEKGHSAVDWSTRPLPEPWLRYAALDVELLVDLRDALEKE
LDRQGKLEWALQEFDAIATAPPAEPRKDPWRRTSGMHKVRRRRQLAVVRELWQTRDRIAQ
RRDVSPGKVLSDAAIVEAALALPGNVHVLAGLNGFGHRMGRRQLEQWQAAVDRAKALPEA
ALPQPGQPVTGPPPPRAWADKDPAAAARLSAARAGVSSLAERLNMPQENVISPDTVRRIC
WEPPAPADEAAVAAALAGYGARPWQVELVTPVLVDALAAKGA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgctgggggcgccgacaccgttgctcgaaccccgcgagggcattccgcccgtggtcgcc
gacgaggcgggcctcgcccgggtgatcgccgccttcgccgccggctccggtcccgtcgcc
gtggacgccgagcgcgcctcgggctaccgctacggccagcgcgcctacctggtgcagctg
cgccgccagggcgccgggaccgcgctgatcgaccccgtcgcctgccccgacctgtccggc
ctcggcgaggcgctgtccggcgtcgagtgggtgctgcacgcggccacccaggacctgccc
tgcctgcgcgagataggcatggtcccgacgcgtctgttcgacaccgagctggccggccgg
ctcgccggcttcccccgggtcggcctcggcgcgatggtggagggtgtcctcggcttcgtg
ctggagaagggccactccgccgtcgactggtcgacccggccgctgcccgagccctggctg
cggtacgccgcgctcgacgtcgagctgctcgtcgacctgcgggacgccctggagaaggag
ctggaccggcagggcaagctggagtgggcgctccaggagttcgacgcgatcgcgaccgcg
ccgcccgccgagccgcgcaaggacccctggcgccggacgtccgggatgcacaaggtgcgg
cgccgccggcagctcgccgtcgtacgggagctgtggcagacgcgggaccggatcgcccag
cgccgggacgtgtcgccggggaaggtgctcagcgacgcggccatcgtggaggccgcgctg
gccctgccgggcaatgtgcacgtcctcgccgggctgaacgggttcgggcaccggatgggg
cggcgtcagctggagcagtggcaggccgcggtggaccgggccaaggccctgccggaggcc
gcgctgccgcagccggggcagccggtgaccggcccgccgccgccgcgggcctgggcggac
aaggacccggccgccgcggcccggctgtccgccgcgcgggcgggggtgtcctcgctcgcc
gaacggctcaacatgccgcaggagaacgtgatctccccggacacggtgcggcggatctgc
tgggagccgcccgcgcctgccgacgaggcggccgtggctgccgcgctggccgggtacggc
gcgcgcccgtggcaggtcgagctggtcacgccggtgctggtggacgcgctggcggcgaag
ggggcctaa
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