Sinocyclocheilus rhinocerous: 107705115
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Entry
107705115 CDS
T04916
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107705115 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107705115 (exosc4)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107705115 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107705115 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107705115
NCBI-ProteinID:
XP_016363743
UniProt:
A0A673HCV1
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKASELRKVQARTSVFAQADGSAYLEQGNTKALAVVYGPHETRG
SRSKSLHDRAVINCQYSMATFSTAERKRRPHGDRKSSEMSLHLKQTFEAAVLTELYPRSQ
IDIYVKILQADGGNYSACVNAATLALVDAGIPMRDYVCACTAGFVEDTPLADLCHAEESG
GGTSLALALLPRSGNIALLQMDARLHQDHLDALIEAAMTACKGLSKVLDGVVRQHLEEVS
VLIRD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctcgagttgctgtcggatcaggggtaccgactcgatggacggaaagcgtcc
gagctgcgcaaggttcaggcccgcacgagcgtgttcgcgcaggcggacggatccgcgtat
ctggagcagggcaacactaaagcactggccgtggtgtatggaccgcatgagacgcgaggc
tctcgcagtaaatctctgcacgatcgtgcagtcattaactgtcagtacagcatggccacg
ttcagcacggcggagaggaagagacgtccgcacggagaccgcaagtccagcgagatgagc
cttcatctcaaacagacttttgaggctgcggtgctcaccgagctctacccacgatcacaa
atcgacatctacgttaagattctgcaggcagacggtgggaactacagtgcttgtgtgaat
gctgctactctggctctggtggacgctggcattcccatgcgtgactatgtgtgcgcctgc
actgccggctttgtggaggacacgccgctggccgatctgtgtcacgcagaggagagcgga
ggaggaacgtcactggcgctggccctgctgccccgcagcggaaacatcgccctgctgcag
atggacgcccggctccaccaggaccacttggatgctttaatagaggcagccatgacggcg
tgtaaaggtctcagcaaagtcctggatggcgttgtgcgtcagcatctagaagaggtttca
gttctgatcagagattga
DBGET
integrated database retrieval system
