Sinocyclocheilus rhinocerous: 107705536
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Entry
107705536 CDS
T04916
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04140
Autophagy - animal
srx04148
Efferocytosis
srx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107705536
04148 Efferocytosis
107705536
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107705536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107705536
Membrane trafficking [BR:
srx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107705536
Hops complex
107705536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
107705536
NCBI-ProteinID:
XP_016364329
UniProt:
A0A673FJW7
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAFVTANWNPLGDAFYRKIELYEMGWNLKDGLRDCLVAAAPYGGPIALLKAHNRRSPSAR
PQLEIFSSSGLPLASFPWKSGVVKQLGWTVSDDLLCVQEDGTLLVYDLLGGFKRHFSMGN
EVSQSQVLETKIFHSPYGTGVAILTGALRFTLATNIDDIKLRRLPEVPGLQGAPSCWAVL
TQDRQSKVLVANGSHLFVLDNTACTPVTPPGLSPQASSIVHMCVSFSYKYLALLTDSGHV
WMGTSNLKEKLSEVDTKIKAPTKQMAWCRRPKSQQPSAVVMWDGLLLVVGECKETIQYHL
DDDSILVPELDGVRIISGTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLSEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPEQFVGMCR
DLRVLNAVRDYTVGIPLSHTQFKQMTIQVLIDRLVYRKLYPLAIEVCRYLKTPEYQGVSR
VLKHWACYKVQQKEESDEVIAKAVSVKLADAAGISYSEIATKAYESGRTELAIKLLEFEP
RSGEQVPLLLKMKKSPLALSKAIESGDTDLVYTVVMYLKNELNRGDFFMMLRNQPVALSL
YKQFCKHQEQDTLKDLFNQDDDHEELGNFYVKASYKEQRLEARIGHLQSAVDEYYKAKNE
FSAKTTEDEMRLLRFQRKLEEEKGEQLVGFSLHDTMTTLLSVGLHKHAEQLYKDFRVPDK
RFWWLRLKALAEKEDWEELEKFSKSKKSPIGYLPFVEVCIKHHNKYEARKYVSKVTLEQK
VKAHLAVGDVEGAAEAAIERRNESEIGTVLSRCSATTDHLLVERLNRAKATVAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaaccctctgggcgatgctttttacagaaagattgaa
ttgtatgagatgggctggaatctgaaagatggtctgagagactgtctggttgctgcagct
ccatatgggggtcccatcgctctcctaaaggcacataaccgacgctctcccagtgccaga
cctcagttagagatcttctcttcctcaggactgcctctggccagctttccatggaagagt
ggagtggtgaagcaactgggttggacggtgtctgatgacctactgtgtgttcaggaggat
ggcactttgcttgtctacgatctcttgggtggcttcaagagacacttcagcatgggcaat
gaagtttctcaaagtcaggtgctggagaccaagattttccattcgccgtatgggacaggt
gttgccatattgacaggtgccttgcgattcactttggccacaaacattgatgacataaaa
ttgaggcggttacctgaggttccaggtctacagggggcgccctcatgctgggcagtcctg
actcaggacaggcaaagtaaagtgctggtggccaatggatctcatctgttcgtcttagac
aatacagcttgcacacctgtgactcccccaggtctctctccacaagcgtccagtatagtt
cacatgtgtgtctcattcagttataagtatctggcgctcctcactgactctggccatgtg
tggatgggcacgtcgaacctaaaggagaaactcagtgaggtggacaccaaaatcaaagct
cccacgaaacagatggcctggtgtcgcaggcccaagagtcagcagccatcggctgtggta
atgtgggatgggctcctcctagtggtgggagagtgtaaagaaacaattcagtaccatctg
gacgatgactcaattctggtgccagaactggacggggtccggatcatcagtggaacacac
catgagctgctgcaagaggtcccaggtgcatgcgaggagatctttaaaattgcctcaatg
gctcctggagcactactgctagaggcacataaagaatatgagaaagagagtcagaaggca
gatgagtatctgagagaaattaaagagcagagtctactgagcgaggctgtgaggcagtgt
gtggaggccgccggacatgaacatgaacctgagacacagaaaacactcttgagggcggcc
tcatttgggaagtgctttttgagtaattttcctccagagcagtttgtcggcatgtgtaga
gacctgcgggtgttgaatgcagtccgagactataccgtcggcattccactttcccacact
cagttcaaacagatgaccatacaagtgctcatcgacagactggtgtatcgtaaactctat
ccactggctattgaggtttgccgctatttaaagactccagaatatcagggagtgagccga
gtactcaaacactgggcctgctacaaggtccagcagaaagaagaatcagatgaagtcata
gcaaaagctgtgagtgtgaagcttgctgacgctgctggaatctcctattctgaaatcgcc
actaaagcatatgagagtggacgcacagagctcgccattaagttgttggagtttgagcct
cgctctggtgagcaggtcccactgctgttaaaaatgaagaaaagccctctggctttaagt
aaagccattgagagtggagacacagacctcgtgtacacggtggtcatgtacctgaagaat
gagctgaacagaggagacttcttcatgatgttgaggaaccaacccgtggctctgagcctc
tacaaacagttctgtaagcatcaggagcaggatacactaaaagatcttttcaatcaagat
gatgatcatgaagaacttggcaatttctatgtaaaggccagctataaagagcagagactg
gaagctcggattggtcatttacaaagtgctgtggacgagtactacaaagccaagaatgaa
ttttctgccaagacaacagaagatgaaatgcgtctgctgcggtttcagaggaagctagag
gaagagaagggtgagcagctcgtgggattctcccttcatgacactatgaccacactgctg
tctgtgggactacacaaacacgccgaacaactttacaaagacttcagagtgcccgacaag
aggttctggtggctgaggttgaaggctctggctgagaaggaggattgggaagagctggag
aaattttccaaaagcaaaaagtcccctattggatatctgccgtttgttgaggtgtgcatt
aaacaccataacaaatatgaagccaggaaatatgtgtcaaaagtcacactggagcagaag
gtgaaagctcaccttgctgtgggggatgtggaaggtgccgcagaggctgctatcgagagg
cgtaatgaatcagagatcggtactgttctgtcacgctgttcagccaccactgatcatctt
ctggtggaacgcctcaaccgtgctaaagcaactgttgccaaaaagtga
DBGET
integrated database retrieval system
