Sinocyclocheilus rhinocerous: 107705733
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Entry
107705733 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23 isoform X1
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107705733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107705733
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107705733
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107705733
Complex C
U5 SnRNP specific factors
107705733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107705733
NCBI-ProteinID:
XP_016364662
UniProt:
A0A673JZI9
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MAGDSSDKKDLDAAGKEREARKRSRSRSRDRDRKGSPGRERKRNRSRERKRSRSRSKSPD
RDRRQKERDRDRGRKDRERDRDRRDKDRSKKSRSTSPKSKDLKLKREKDVKKEEEEKDEK
KEKVQPLSLEELLAKKKAEEEAESKPKFLSKGEREAEAIKRREQQTEERRRQVDEERKKR
RIFQDIGRKMLEDPQERERRERRERMERENNGNDEDDGRQKIREEKDKGKELQAIKERYL
GGMKKRRRTRHLNDRKFVFEWDASEDTSTDYNPIYKEKHQVQLYGRGFIAGIDLKQQKRD
QSRFYGDLMEKRRTLEEKEQEELRLKKVRKKEAKQRWDDRHWSQKKLDEMIDRDWRIFRE
DYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVA
ETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGKPL
GIRTVAVIGGISREDQGFKLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMI
DMGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAVER
LARSYLRRAAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLDVLASGFEPPIIIFVNQKK
GCDVLAKSLEKIGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSM
VLNYDMAKNIEDYIHRIGRTGRAGKSGMAMTFLTKEDCSVFYDLKQAILESPVSTCPPEL
ANHPDAQHKPGTILTKKRREETIFA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgactcctctgataagaaggacctggacgccgcagggaaggagcgggaggct
cgtaagcgcagtcgctctcgctccagggaccgtgatcggaaaggatctccgggcagagaa
cgcaaacggaaccgatcccgtgaacgcaagcgctcccgcagcagatccaaatctcctgac
cgagatcggcgtcaaaaagaaagagacagagacaggggccgcaaagacagagaaagagac
agggacagacgggacaaagaccggtccaagaaatcaaggagcacttcccctaaatccaag
gatttgaaattaaagagggagaaggatgtgaagaaagaggaagaggagaaagatgagaag
aaagagaaggtgcagcctctctctcttgaagagctgcttgctaagaagaaagcagaagaa
gaggcagaatctaagcccaagttcttgtctaaaggggagcgagaagctgaggccatcaaa
cggagggagcagcagacagaggaacgccgcagacaagtggacgaggagaggaagaaacga
agaatatttcaggacatcggcaggaagatgctagaggatcctcaggagagagaacgacgg
gaaagaagggagcggatggaaagagagaacaatgggaatgatgaagatgatgggcgacag
aagattagagaagaaaaagacaaaggaaaagagctgcaggccataaaggagcgttatctt
ggcgggatgaagaaacggcggcgcacacgccatctgaatgacaggaagtttgtctttgag
tgggatgcgtctgaagacacatcaaccgactacaatccaatctataaagaaaagcatcag
gttcagctgtacggtcgaggcttcatcgccggcatcgacctgaagcagcagaagagagat
cagtcccgattctacggagacctgatggagaagagacggacccttgaagagaaggagcaa
gaggaattgaggctgaagaaggtccgaaagaaggaggccaagcagcgctgggacgaccgg
cactggtctcagaagaagctggatgagatgatagacagagactggagaatcttcagagag
gattacagcatcacgaccaaaggaggaaagatccccaaccccatccgcaactggaaggag
tattcactgccgccacacattctggaggtcatcgaaaagtgtggatataaggatcccaca
cctatccagaggcaggccattcctattggcctgcagaaccgtgacatcattggtgtggcc
gagactggtagtggtaaaaccgccgccttcctcattcctttattggtctggatcaccact
ctgcctaagattgacaggatcgaggactcagatcagggaccgtatgccgtcattctggcc
cccactcgtgagctggcacagcagatagaggaggagacgattaaattcggcaaaccgctg
gggatccggacagtggctgtgatcggtggaatatccagagaggatcaaggcttcaaactc
aggatgggttgtgagattgtcatagccacacccggtcgtttgatcgacgtgttggaaaac
cggtacctcgtcctgagcagatgcacgtatgtggtactggacgaagccgacagaatgatt
gacatgggctttgaacccgacgtccagaagattctggagtacattcctgtgaccaatcag
aagccagacacagatgatgcggaggaccccgaaaaaatgatgcagaactttgagtcaggc
aaacacaaatacagacagacggtcatgtttacggccactatgcctcctgcagtggagcgt
ttggccagaagctacctccgacgggctgcggtggtgtacatcggctctgcaggcaaacct
cacgagagagtggagcagaaggtcatcctcatgtccgagggtgaaaagaggaagaagctg
ctggatgttttggcaagtggctttgagccgcccatcatcatcttcgttaaccagaagaag
ggttgtgatgtgctggctaagtctttggagaagattggatacaatgcttgtactcttcac
ggcggtaaaggtcaggaacagagagagttcgctctgtccaacctaaaggctggagctaag
gacatcctggtggccacagatgtggcaggcagaggtatcgacatccaggacgtctccatg
gtcctcaactacgacatggctaagaacatcgaggactatatccatcgtattggccgaacg
ggtcgtgctggaaagagtggtatggcgatgaccttcctgaccaaagaagactgttctgtg
ttctacgacctgaaacaggccatcttagaaagtcccgtgtctacctgcccgcccgagctg
gccaatcacccagatgcccagcacaagcctggcaccatccttaccaagaagaggagagag
gagaccatctttgcctga
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