Sinocyclocheilus rhinocerous: 107706346
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Entry
107706346 CDS
T04916
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107706346
09122 Translation
03013 Nucleocytoplasmic transport
107706346
03015 mRNA surveillance pathway
107706346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107706346
03041 Spliceosome [BR:
srx03041
]
107706346
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107706346
Spliceosome [BR:
srx03041
]
Complex C
Other components
EJC/TREX
107706346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
107706346
NCBI-ProteinID:
XP_016365508
LinkDB
All DBs
Position
Unknown
AA seq
1782 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSTHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAETDGTDHEDHTEANDSIC
AAPNQDVAPSLVDQHKGGTVVAGGFGVTGSESDELAEKETPGQPSPLAPAQPGAIASLSV
RVVGERGPTSSHEPAESDDDSEGGDDNDDDEEEWNANAQRSRRAQPPKSQPVRERSGSSQ
QQQQPPPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRISSSSSS
GSSSSDSRSSSPEPAGDSTERRPGPLTLLARKMASEGAFSGAGKRDREVMDGQRSHHEGV
VSAITHTANAASVLSYPSSVISNQGVGVVRTAMVEESDGMKQDDLLWEQENKKRERQREQ
GRLKALEKEKALEKERARVLERERQEREEALKRERALQREREEKEKALQQEREEKEKLER
EQALERERVRFEREQALERERQDKERLERERQEALERERLERERLEKERQEREQALERER
LEKERQEREQALERERLEKERLEKERQEREQALERERLERERLEKERLEREQALERERLE
RERLEKERQERQQALERERLERERLEKERQEREQALERERLEREQLEKERQEQERQKKEQ
ALERERLEREAALEKERQEMERAKEQERLEKERALERERHEREAALEKERQEMERAKEQE
RLEKERALERERHEREAALEKERQEMERAKEQERLEKERALERERHEREAALEKERQEME
RAKEQERLEKERALERERHEREAALERKRQERERIEKKKALEEEQLQKEQALELEREAHR
KAEEERERERALEREREEQERALKEEQQRALEERERLLEQKRVQEEKEKASKPEKEEERE
KERESRLPLWKRGRDIGGLSYPTPHAASLESPTEKPDESETGEPQSTGKDARSTEPVLQQ
SPIAATKLSPQSSSKKSRFLRDAPLTTALPSSPTSVLKRPRSFSDSPMPQAPSIPLTSKP
EEKDAAQVHQTSVFVSAPHELESKTPKVSAQQHAQQVEAKMETSEDSEASKDTKHKTLRR
VEDEEKSPLPPPEEKKRGREREKKEVEKKKRKSSSSSDSSSSNSDSGSSSSSRSSSSSSS
SEEEKSHSTSDGRKSKEVQKDSSSQPTEKVGQTVAEKPPTAQRKKRVFTEQEEKDLGNED
VIQTKKPCLELQDEKETRGRKDDIDEDDTNKDTTSEVKEAVMAEPEKVPESSEESTTPKT
FSARRISLGSSKQSPGVVSSEGEAEAASSAGAGRKRRWGSSTAVTAKKPSISITTDSLKS
LIPDIKPALGQEAVLDLHPEEMHLSGEEEGGERGDQDLKIRRTVTQVVPSDTQENGQKES
KRSEHEDEEERSEGQDRLSQEEKMESSIQVSMETEPSSPGRDVEMKTVTPSDTLIRRSIS
QQKSGVSITIDDPVRTAKQPSPPRGKLSNIVHVCNLVRPFTLGQLKELLNRTGTVVEEGF
WIDKIKSHCYVTYSSAEEAMATRTALHGVKWPQSNPKFLSVDFCTQEELDFHRGLGPAGE
KPTEEPRGAVAAGPGRPVPTPLLPERDQWAEREREMERRERTRAEREWDRDKVRDFSKPG
EEREAGARRSRSRDRERRRKERGKSKERKTDKKEKGPEDPPAKLLDDLFRKTKAAPCIYW
LPLTEEQAAQRAAARAERMREREKRRKEMEEEDKKREEERRERMKTSGPTGGEGERDRDR
GREREREGDKRKEGYRRPGVNSASGSRRSRSHSDPPPRERRR
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggaggccgctccattcgctccgggtggcg
gatttgaaagcggcattggaagagagagggcttccgaaaagcggacagaagaatgcactc
atcaagaggctcaaaggggctctcatgttggagaaccttcagaaaacctccactcatcac
attggcctgcagcctaactcccggattggcgaggaaatgagtcagaacagcttcattaaa
cagtacctggccaaacagcaagagcttctcaggcagcgcttggagagagaagcacgagag
gcagctgaaactgatggaacagaccatgaagaccacacagaggccaatgacagtatttgt
gctgcccctaaccaggatgttgctccctccttagttgaccaacacaaaggaggtacagta
gtggctgggggatttggggtgactgggagtgagagtgatgagctcgcagaaaaagaaacc
cctgggcagccgtcccccctcgcacctgcccagcctggcgcaatagcctctttatctgtg
cgggttgttggtgaaagaggaccaacttcaagccatgaaccggctgagagtgatgatgac
agtgaaggcggggatgacaatgatgacgatgaggaggagtggaacgccaatgctcaacgg
agtcgtcgagcacagcctccaaaaagccaaccggtgagggaaagatctggtagctcgcag
caacagcagcagccgcccccccaacacatacctttactttcacagcagctcagacagccc
actcctcctccatcccctcctcctgaactctcttttccactcccagacacacctaaacag
agcccacctagtcctggagagcccccgtctaggcagcgcatatctagttcttcgagctct
ggtagttcaagtagtgacagtcgtagcagtagccctgaaccagcaggcgactccacagaa
cgcagaccaggcccactgaccttactggcacgcaagatggcgtctgagggagctttctct
ggtgcaggaaagcgtgatagggaggtaatggacggacagagaagccaccatgagggggtt
gtgtctgcaattacgcacacagctaatgcagcttcagttttgtcataccctagttcagtg
atctcaaaccaaggtgttggtgtcgttaggacagcgatggtggaagagagtgatggcatg
aagcaggatgatcttttatgggagcaagaaaacaaaaagagggaaagacaacgagaacaa
gggaggctgaaagccctagaaaaggagaaggcattggaaaaagagcgagcacgagttttg
gagcgggaaagacaggagcgagaagaagctctgaaacgggagagggctttacagcgagaa
agggaagagaaagaaaaggccttacagcaggagagggaagagaaagagaagcttgaaaga
gaacaagcgttggaaagagagcgagtacgattcgagagagaacaagctctggaacgagag
aggcaagataaggagagactggagagagagaggcaggaagctttagagcgggagagattg
gagcgagagaggctggagaaagaaagacaagaacgagaacaagccttagagagagagaga
ctcgagaaagaaagacaagaacgagaacaagctctagagagggagagactcgagaaagaa
agacttgagaaagaaagacaagaacgagaacaagctctagagagggagcgattggagaga
gagcgacttgagaaggaaagactagaaagagaacaagctctagagagggagagattggaa
agagagcggcttgaaaaggaaagacaagaacgacaacaagctttagagagggagcgattg
gaaagagagcggcttgagaaggaaagacaagaacgagaacaagctttagagagggagaga
ttggaaagagagcagcttgagaaggaaaggcaggaacaagagaggcagaaaaaagaacaa
gctctagagagggagagactggaaagagaagctgctttggagaaagagagacaagaaatg
gagagggccaaagaacaggaaaggctggagaaagagagggctttggaaagagaaagacat
gaaagagaagctgctttggagaaagagagacaagaaatggagagggccaaagaacaggaa
aggctggagaaagagagggctttggaaagagaaagacatgaaagagaagctgctttggag
aaagagagacaagaaatggagagggccaaagaacaggaaaggctggagaaagagagggct
ttggaaagagaaagacatgaaagagaagctgctttggagaaagagagacaagaaatggag
agggccaaagaacaggaaaggctggagaaagagagggctttggaaagagaaagacatgaa
agagaagctgctctggaacgcaagaggcaagagcgagaaagaattgagaaaaagaaagct
ttggaagaagaacagttgcagaaagaacaagctcttgagcttgagagagaagcacatagg
aaagcagaggaggagcgggagcgagagcgagctttagaaagagagagagaggagcaggag
agggctttaaaagaagagcagcagagagctttggaggaaagggaaagacttttggagcaa
aaaagagtccaggaggaaaaagaaaaggcttcgaaacctgaaaaagaggaggaacgtgag
aaagaaagagaaagtcgtcttcctctgtggaagcgtggtcgtgatatcggtggtctctcc
tatccaacgcctcatgctgcttctctggaaagtccaacggagaagcccgacgagagtgag
actggtgaacctcagagcactggcaaagatgctcgatctacagagcctgtcctacagcag
tcacccatagctgcaacaaaactgtctcctcaatcttcttctaagaagtcccgcttcctt
agagatgcccctctgacaaccgctctcccatcctctccgacttctgtgctgaagagacct
cgtagtttctcagatagcccgatgccacaagccccgtcaattccattaacatctaagcct
gaggaaaaagatgccgctcaggtccatcaaacatcagtctttgtttcagcacctcatgag
cttgagagcaaaacccccaaggtgtctgcccaacaacatgcacaacaagtggaagcgaag
atggagacgtcagaggatagtgaggcaagcaaagacactaaacataagactctcagaaga
gttgaggatgaggagaaatctcctttacctcctccagaggagaagaaaagaggaagggaa
agggaaaagaaagaggtggagaagaaaaaaagaaagtcatcatcctccagcgattcctct
tcatccaactcagattctgggtcttcatcctcctcacgctcctccagttcatcatcatca
tcagaggaggagaaaagtcattccacttcagatggtaggaagtctaaagaggtccagaaa
gattcttcatctcagcccacggaaaaagttggtcaaactgtggctgaaaagcctccaacc
gcccaacgcaaaaaacgagtcttcacagagcaggaagaaaaagacctgggcaatgaggat
gtcatccaaaccaagaaaccctgccttgaactacaagatgagaaggaaacgaggggaaga
aaggacgatattgacgaagatgacactaacaaagacactaccagtgaggtgaaggaggct
gtcatggcggagcctgagaaggttccagagagcagtgaggagagcaccacgccaaagacc
ttctcggcccgaaggatttctctcggcagcagcaaacagtctcctggggtggtgagttct
gagggagaagcggaggccgcaagcagtgctggcgctggcaggaaaagaagatggggctcc
agtacagctgtcactgccaagaaaccctccatcagtatcaccacagactctttgaagtct
ttaataccagacatcaagcctgctttgggtcaggaggctgtgttagacctgcatccggag
gagatgcatctctctggggaggaggaaggaggagagaggggcgaccaagacctgaaaatt
aggcgaactgtaacacaggttgtgccctctgacacacaagagaatggacagaaagaatct
aaaagaagtgaacatgaggatgaggaagaaagaagtgaagggcaggataggcttagccag
gaggaaaagatggaaagctccattcaggtttccatggagacggagccgtcatcccctggg
cgagacgttgaaatgaagacagtcactcccagtgacacactgattcggcgttccattagc
cagcagaagtcgggtgtgagtatcaccatcgatgacccagtccgcacagccaaacaaccc
tctcctcctcgtggaaagctgtctaacattgtccatgtctgcaacctggtgaggccgttt
acgctggggcagttgaaggagctgttgaatcgcacagggactgtagtggaggaaggtttc
tggattgacaagattaaatctcactgttacgtcacatactctagtgcagaagaggcaatg
gccactcgtacagcgctacatggggttaagtggccccagagtaaccctaagttcctcagt
gttgatttctgcacgcaagaggagttggacttccacaggggtttgggtccagcaggcgaa
aaaccaacagaggagcctcgtggggcggtagctgctgggcctggccgtcccgtacccact
cctctcctaccagagcgtgatcagtgggcagaacgagaaagggaaatggaaaggagggag
agaacacgtgcagaaagggaatgggacagagataaagtcagagacttcagcaaacctgga
gaggagcgggaagctggggccagaagatcgcgatcacgagatcgtgaaaggcgacgcaag
gaaagagggaagagcaaagagaggaaaaccgataagaaggaaaaaggaccagaggatcca
cctgctaaactgctggatgacctcttccgcaaaaccaaagcggctccgtgcatttactgg
ctccccctcactgaggagcaggcagcacagagggcagcagctcgtgctgagcgcatgagg
gaaagagagaagaggaggaaagagatggaagaagaggataagaaacgtgaggaggagcgg
cgagagaggatgaagactagcgggcccaccggaggggaaggtgagagagaccgagacaga
ggtcgagaaagggagcgagagggggataaacggaaggagggctaccgtaggcctggtgta
aacagtgcaagcgggagcaggaggtcacgaagccacagcgaccctccacccagagaacga
cgacgctaa
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integrated database retrieval system
