Sinocyclocheilus rhinocerous: 107706393
Help
Entry
107706393 CDS
T04916
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107706393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107706393
Membrane trafficking [BR:
srx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107706393
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107706393
Exosomal proteins of bladder cancer cells
107706393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
107706393
NCBI-ProteinID:
XP_016365584
UniProt:
A0A673MWQ0
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDAEGVTLFDVQQK
RSLATVKIAKVKYVVWSSDANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLAVECGNIEV
ALEAAKTLDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDISERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEMVPEVDTNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGRAGQMVADLDMDAS
GGEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGEGWDVEEDLDLPPELDVPSVGGGG
AEGEGFFVPPTKGTSPTQMWCNNSQLAVDHILAGSFETAMRLLHDQVGVVQFGPYKQLFM
QNLSRGRTCYLGLPSLPYLHSYPLRNWKDSGAKGGLPAVGLRLSDLISRLQQGYQLTTAG
RFEEAVDRFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDTLDQ
QKRLCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQ
TRKILAACEKSLTDAHQLNYDPHNPFDICAASFTPLYRGRPVEKCPLSGACYCPKYKGEV
CRVTQVTEIGKDVIGLRVSPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgagacaaagtcggcccgagtgaaagggctgagtttccacccgaaa
cggccctggattctcgctagtttgcacaacggtgtcatccagctgtgggactatcgcatg
tgcaccctcatcgacaagtttgacgagcatgatggtccagtcagaggtattgacttccat
aagcagcagccactgtttgtgtcaggaggagatgactacaagatcaaggtatggaactac
aagctgcgtcggtgtctcttcactcttcttggacatcttgactacattcgtaccacattc
ttccaccacgagtatccctggatcctgagtgcctcagatgaccaaaccattcgcatttgg
aactggcagtccagaacatgtgtctgtgtgctgacggggcataatcactatgtgatgtgc
gctcagttccatccatctgaggacctggtggtgtcggctagcctggatcagactgtgcgc
gtgtgggatatttccggtctgaggaagaagaacttgtctcccggtgctgtggacacagag
gtgcgtggcatctctggtgttgacctgtttggggcctctgatgcagtagtgaagcatgtt
ctggagggtcacgatcgaggtgtaaactgggcagccttccatcccagcatgcctctcatt
gtgtcaggagcagatgaccgccaggtcaagatctggaggatgaacgaatctaaagcgtgg
gagttggacacctgtcgagggcattataacaatgtgtcctgtgcggtgttccaccctcgt
caggagctcatcctgtccaactctgaggacaagagcatccgcgtgtgggatatgtccaag
aggacaggtgtccagacctttcgcagagatcacgaccgtttctgggtgctgggggctcac
cccaacctcaacctgtttgctgctggccatgacagtgggatgttggtgtttaaactagaa
agggaacgtccagcttacgccgtgtatggtaacatgctgtactatgtaaaagatcgcttc
ttgcgtcagctcgacttcaacagcagtaaggatacggctgtcatgcagctgcgcagtgga
tccaaattcccagtgttcagcatgtcctacaaccctgcagaaaatgctgtgctgttgtgc
actagagctactaaccttgaaaacagcacctatgatctgtactctattcccagagagagt
gattcccagaatcctgatgctcctgagggaaagcgttcctctggtctcactgctgtttgg
gtggccaggaaccgttttgcagtacttgaccgcatgcactcactcttgataaagaacctg
aagaatgagattgtgaagaaggtccaggtaccgagctgtgaggagatcttctacgctgga
actgggtctctgctgctgcgtgatgctgaaggagttacgctgtttgatgtgcagcagaag
cgctccctcgctacggtcaaaatcgctaaagtcaaatatgtggtgtggagctccgatgcc
aaccatgtggctctgctggccaaacacgccatcatgatctgtaacaagaagttagagagc
ctgtgtaacatccacgagaacattagagtgaagagtggcgcctgggccgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatatgctctcacctccggcgatcatggtata
atccgtacattggatcttcccatctacgtgacaagagtcaggggcaacagtgtgtactgc
ctggatcgtgagtgcagaccacgagtgctcaacattgaccccaccgagtaccgttttaaa
ctggctctggtcaatcgcaaatatgaggaggttcttcatatggtgcgtaacgctaaactg
gtaggccagtccatcattgcctacctgcagaagaagggctacccagaagttgcgctgcac
tttgtcaaagatgagaagactcgttttagcctggctgtggagtgtggaaacattgaggtg
gcattagaggctgcaaaaaccctggatgaacgaagctgctgggagcgtctcggcgaggct
gctcttctgcagggccatcaccaggtagtggagatgtgctaccagagaaccaagaacttt
gacaaactcaccttcctgtacctcatcactggcaacctagccaaactcaggaagatgatg
aagatagctgagataagaaaggacatgagtggacactatcagggtgctctttacctgggt
gacatcagtgagcgtgtgcgaatcctgaagaactgtggacagaagtctctggcttacctg
actgctgccactcatgggatggatgaagaggctgaagccctgaaggagacctttgacctg
gaaaaagaaatggtgccagaagtggacaccaatgcccagctgttgcagccgccacctccc
atcaaccccttggacaccaactggcctctgctcactgtctccaagggcttcttcgaggga
gccattgctgccaaaggacgtgctggccagatggttgctgacctggacatggatgcttca
ggaggagaaggctggggagaagatgcagaacttcatctggatgaagatggattcatggat
gctcaagagggactgggagatgagggagctattgggaaagaggagggagaaggctgggat
gttgaggaagatctggacctcccgccagaattggacgtaccttctgttggtggaggtggc
gcagagggtgaaggtttctttgtgccgcccaccaagggcacaagccccacacagatgtgg
tgcaacaactctcaactggctgtggatcacatattggctggatcttttgagactgctatg
aggttactgcatgaccaggttggtgtggttcagtttggaccctataagcaactgttcatg
caaaacctgtcccgtgggcgcacctgttacctgggcctgccatctctgccctacttgcac
agttaccccctgaggaactggaaggacagcggggctaaagggggtctgccagcggtgggc
ctacgtctctccgatcttatttcacgcctgcagcagggctatcagctgaccacagcaggg
cgctttgaagaagctgttgatcgtttcagagccattctcctctccgtaccactgcttgtg
gtcgacaacaaacaagagattgcagaggctcagcagcttatcactatctgtaaagagtat
attattggcctcaccatggagacagagaggaagaaacttcctaaagacactctcgatcag
cagaagagactttgtgagatggcagcatatttcacacattgcagtctgcaacctgtccac
atggtgttggtgttgagaacagcactcaaccttttcttcaaactgcgtaacttcaaaaca
gcagcgggtttcgctcgccgtctgcttgagttgggtcccaaaccagaagtagcacagcag
acaagaaagattcttgcagcatgtgagaaaagcttgacagatgctcaccaactgaactat
gacccccacaatcccttcgacatctgtgcagcctctttcactcccctgtaccgcgggcgg
ccagtagagaaatgtcccctgtctggagcttgctactgccccaaatacaaaggagaggtc
tgcagggtcacacaggtaaccgagattggtaaagatgtgatcggattgcgtgtcagccca
ctgcagttccgttga
DBGET
integrated database retrieval system
