Sinocyclocheilus rhinocerous: 107706729
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Entry
107706729 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107706729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107706729
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107706729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Augurin
Motif
Other DBs
NCBI-GeneID:
107706729
NCBI-ProteinID:
XP_016366020
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MDQTIRDKLSQLVEKLTTSGEPQLNQDKMKEVKKICKVSTDYVDNFYNLIMTQLNQEHAE
IRLSAFQMVNEIFSRSHHFRGLLITIFQEFLELTVETDTEQPLPPPKEVVRKLRTLAIQT
VQSWHATYGEAYKKLSLGYHFLKQIDAINFHDVEARTLAERKIQKEKQKRLERIYKEKLE
KAKQEMEEMTTEIEETLTEMNNCIKLLATDDLNLFNEEAAVAKTSAGAENISDQPCCSKD
LSNEQNGKMTEKTNDXKTDKCSDESDTEEVPDEDAFLRSTGLMSYRYQLELNVSTDLKLR
ETEENEAIVNTVRDLHRLITTRHLPLVQSWIQVFTKVGVEEELMRKATELKKSLEYALRK
HECLHIDYKNRERRVMRAPEDGEDDDDDFVDVPEKEGYEPHIPEHLRAEYGLDETPSTST
SGAKAKPSKPVPLVSSSLSRLKRKMYDEEQDPTYAAATLRVLKQRIHSTPSTSMSGGSTE
VAVCSSDHGGLNKDYASVKAPVVPFGVDLYYWGEEQPTAGKIIKNASQHQFWVPHEVEEE
VSAEMKSRIITFAGKCKPVEHKCKAPMPNGSLCERQDRVKCLFHGRIIPRDELGRPVSPE
DALRLEKEKRKGEEEQPDWRDPELMREIEAATGEDLGSSKTYGKGKNGNKGKSKKKYPNL
TDLKQNASTSRSRLEKKVFNKSSMRRVTEVMNKMDKRQHEKFSNQFNYALN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaacaatacgtgataagctctcacaactggttgagaagttgactacctctgga
gaaccacagttaaatcaagacaaaatgaaggaagtgaagaaaatatgcaaagtttccact
gactatgtcgataatttctacaacttgattatgacccagctgaaccaagagcatgcagag
atccgtctctctgccttccaaatggtcaatgagattttcagccggtcgcatcacttcaga
ggtcttctcatcacaatctttcaggagttcctggaacttacagtagaaacagacactgag
caaccgttgcctccacccaaagaggtggtgagaaaactaaggacacttgccattcagact
gtgcagtcatggcacgccacgtatggagaggcgtacaagaaactgtctctgggatatcac
tttcttaagcagattgatgccatcaattttcatgatgttgaagcaagaacactggctgag
agaaaaatacaaaaggagaaacagaagagactggaaagaatttacaaagagaagcttgaa
aaggccaaacaggaaatggaggaaatgacgactgagattgaggaaaccttgactgagatg
aacaactgcataaaactgcttgcaaccgatgacttaaacctgtttaacgaggaagcagca
gttgctaaaacctctgcgggagctgagaacatatctgaccaaccctgctgcagtaaagac
ctgagcaatgagcagaacggaaagatgaccgagaagacaaatgatnngaaaacagacaag
tgtagtgacgagagtgacacagaggaagttcctgatgaggacgcgtttctccgcagcact
ggtttaatgtcttatagatatcagctggagctcaatgtgtccacagatttaaaattgagg
gagacggaggagaatgaagccatagtaaacactgtgagggatcttcatagactcatcaca
accagacacctgcctcttgtgcagtcctggatccaggtctttacaaaggtaggtgttgag
gaagaactgatgaggaaagccactgagttaaagaaatcactggagtatgccttgagaaaa
cacgagtgtcttcatatagattacaaaaacagagaaagaagagtgatgagagctcctgaa
gatggagaagatgacgacgatgattttgtagacgtgccggaaaaggagggctatgaacct
cacattcctgaacatctgcgtgcagagtatggacttgatgaaactccctcaacgtcaacc
tctggggccaaagccaagccatcaaaacctgttcctcttgtgtcctccagtctctctcga
ctcaagaggaagatgtatgatgaagagcaggaccccacctatgctgctgcaacgctgcgt
gtgctcaaacagaggattcattctactccttctacaagtatgtctgggggctctactgag
gtcgcagtgtgcagcagtgaccatgggggcttaaacaaagactatgcctctgttaaggcc
cctgtcgttccgtttggtgtggatctttactactggggagaggagcagcccactgctggc
aaaatcatcaagaacgcatcacagcaccagttctgggtgcctcatgaggtggaggaggaa
gtgtctgcagagatgaagtctagaattatcacctttgctgggaaatgtaaacctgtggag
cacaagtgcaaagcaccaatgccaaatggatcgttgtgtgaacgccaagacagagtaaag
tgcctgttccatggacgcattatccctcgggatgagctgggcaggcctgttagcccagaa
gatgcactgcgattggagaaggaaaagaggaagggcgaggaggagcagccagattggcga
gacccagagctcatgagggagatcgaagctgcaactggagaagatctgggctcctcaaag
acgtacgggaagggaaagaatggcaacaaaggaaagtcaaagaaaaagtacccaaacctt
acagatttaaagcaaaatgccagtacatctcgttcaagactagagaagaaagtctttaac
aagagctccatgagacgagttacggaggtcatgaacaagatggacaagaggcaacatgag
aaattttcaaatcaatttaactatgcactgaattaa
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