Sinocyclocheilus rhinocerous: 107706765
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Entry
107706765 CDS
T04916
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107706765 (ddx55)
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107706765 (ddx55)
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Pre-60S particles
Helicases
107706765 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
YbjM
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
107706765
NCBI-ProteinID:
XP_016366058
UniProt:
A0A673K0R7
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MENFSDGKWESLPLKLHDSILQTLKELKFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPALEILLKREEKLKKMQVGALIITPTRELALQISEVMGRFLQGFPQFRQILLIGG
SNPIEDVEKFKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPA
RLSNYYAICRAEEKFNALVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLIKNVSIHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQPYPPVKDVVDVLPKLKAMALGDRAMFEK
GMKAFVSCVQAYAKHECSLIFRIKDLDFAALARGFGLIRLPKMPELRGKTFPDFKQEAID
TDSIRFKDKNREKQRQKWLAEQKEKEMPLKKNFIKNKAWSKQKIKKDKKKKKAAKRKLDE
ESDVDDEDLNELLNDTRLLKKLKKGKISEEDFDKHLSSAGSSHPKRAEVDRSEGDGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactttagcgatggaaaatgggagagtttgcccctgaaattacatgacagcata
ttacagactcttaaagagctgaaatttacatatatgactcctgttcagtctgcctgcatc
cctctttttatgagtaataaagatgtggctgctgaagccgtgaccggcagtgggaaaacc
ctggcatttgtgattcctgcattagaaattctcttaaagcgagaagagaagttaaaaaag
atgcaggtcggtgcattgatcataacacccacccgtgaactggcactgcagatcagcgag
gtgatgggacgatttctgcaaggatttcctcagtttaggcagattcttttaattggtgga
agcaaccctattgaggacgtagagaagtttaagactcagggagctaatatcataattgcg
acccctgggcgattggaggacatgttcaggaggaaggccgatgggcttgatttggccact
gctgtgaagtctctggacgttcttgtcctggatgaggcagacagattgctggacatgggc
tttgaagccagtttaaacactattctggggtatttacccaagcagcggcgtacagggctt
ttctccgccacacagacgcaagagctggagaagctggtgagggctggtctgcgcaaccct
gtgcgaatcacagtgaaggagaaaggtgtggcggcctcgagcgtgcagaaaacaccagcc
agactcagcaattattacgcaatatgtcgggcagaggagaagttcaacgctttggtggcg
tttctcagacagcacaaacatgagaagcagcttgtgttcttcagcacctgtgcctgtgtg
gagtacttcggtaaagccctggaagtcttgatcaagaatgtcagcatccactgcatccac
gggaagatgaaacataaacgaaacaagatctttgcagatttccgggcgctgaagagtggg
attctcgtgtgcacagacgtcatggcgagaggcatcgacataccagaagtgaactgggtg
cttcagtacgacccaccaagcagtgcaagttcctttgtgcatcggtgtggacgaactgca
cgtatcggaaaccagggcaatgcactcgtctttcttctgccaatggaagagtcgtatgta
aatttcttgtccattaatcaaaagtgtcctcttcagccatatccaccagtgaaagatgtg
gttgatgttctgcctaaactgaaggcgatggctttaggtgacagagcgatgtttgagaag
ggcatgaaagcctttgtgtcgtgtgtgcaggcgtacgccaaacacgagtgtagtctgata
tttcgcattaaagacctggattttgctgctctggcccgtggctttggtctcatccgtttg
cccaaaatgcctgaactgagaggaaagacattcccggacttcaaacaggaggccatcgac
acagactccatccggtttaaagataaaaacagggaaaaacagagacaaaaatggctggcg
gagcagaaagaaaaagagatgccattgaagaagaacttcattaagaacaaagcctggtcc
aagcagaagatcaagaaggataaaaagaaaaagaaagctgccaaaagaaaactggatgag
gaatcagatgttgatgacgaagacttaaacgagcttttaaatgacacgcgtctgctgaag
aaactcaagaaaggaaagatcagtgaagaggactttgacaagcatttgagttcagcgggc
agctcacatcccaaacgagcagaagtggaccgttctgaaggagacggagaatga
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