Sinocyclocheilus rhinocerous: 107706771
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Entry
107706771 CDS
T04916
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107706771 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107706771 (taf5)
03036 Chromosome and associated proteins [BR:
srx03036
]
107706771 (taf5)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107706771 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
107706771 (taf5)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107706771 (taf5)
STAGA complex
107706771 (taf5)
TFTC complex
107706771 (taf5)
SAGA complex
107706771 (taf5)
SLIK complex
107706771 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
VPS8_N
PROPPIN
RAB3GAP2_N
LisH_TPL
LisH_PAC1
VID27
Motif
Other DBs
NCBI-GeneID:
107706771
NCBI-ProteinID:
XP_016366072
UniProt:
A0A673FFD4
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAAVQDGPMELDAEKEAKPEILSDGTSNLSGNTASGTLSSSPLTAAPAGGAPKMEDQQTL
IAVLQFLKRNKLSESVEILRREAGLGEHQEGSQATDGSGGGKGDGDGGDANSLLSRVSIT
SAAAPQSMPVKKDQPDVSVVLSAYSQQGDPPLYQVYYSGLKNFIESVLDCHRAELSQLFY
PLFVHMYLELVYNNHETEAKAFFDKFSGDQECYYQDDLHILCGLTKKEHLKGNEVLLDFR
TSRFVLHISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAG
EAKREVNKAKVFYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSLGSKSKKQDPNA
PQQNRIPLPELKDSDKLDKIMYMKESTKRIRLGPENLPSICFYTFLNAFQGLTAVDFTDD
SSLLAGGFADSTVRVWSVTPKKLRKVKSAGELNVIEKESDDVLERIMDEKTASESKILHG
HSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTHFSPFGYYFV
SGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTVRLWDVLNANC
VRILTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGHTDTIYALKFSR
DGEILASGSMDNTVRLWDSMKAFDEVETDDFTATTGHIHLPDNSQELLLGMYHSKSTPVT
HLHFTRRNLLLAAGAYNSQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggaccgatggagctagacgcagagaaagaggcaaagccagag
attctcagcgatgggacgtctaacctctcggggaacacagcgagcgggacgctgtcctca
tcgcccctcaccgctgcccccgccggcggagccccgaagatggaggaccagcaaactttg
atcgcagttctgcagtttctaaagcggaataaactgtcggagtcggtggagatcctgcgg
cgggaagccggtttaggagaacatcaggagggctcacaggctaccgatggcagcggagga
gggaagggagacggggatggaggggatgcaaactctctgctcagccgggtgtccatcaca
tcagcagccgccccccaaagcatgcccgtaaagaaagaccagccggatgtcagtgtggtg
ttgtcagcatacagccagcagggggacccccccctgtatcaggtgtactacagcggcctg
aagaacttcatcgagtccgtgctggactgtcaccgagcggagctgtcccagctcttctac
cctctgttcgtccacatgtacctggagctggtctacaacaaccatgagactgaagcaaag
gctttctttgacaagttcagcggcgatcaggagtgttactatcaggatgacctgcacatt
ctctgcggcctgactaagaaagagcacctgaaggggaacgaggtgctgctggacttccgc
accagccgtttcgtgctgcacatctcccgagactcgtaccagctgctgaagagacacttg
caggaaaggcataataaccagatatggaacatcattcaagagcacttgtacatcgacatc
tttgacggcatgcctcgcagcaagagccagatcgacagcatgtccggcagtctcgcagga
gaggccaaacgagaagtcaataaagccaaggtattctatggactgctaaaggagccagag
atcgaggtcccgttagatgatgaagatgatgaagcagagaacgaggaagggaagcccaag
aagaagaaaacaaaaaaggacagtctgggctccaagagtaagaaacaagaccccaacgct
cctcaacagaacaggatccctctgccggagctgaaggactcggacaaactggataagatc
atgtacatgaaggagagcaccaaaagaatccggctcggccccgagaacctgccttccatt
tgcttctatacgttcctcaacgccttccagggtttgacggcggtagacttcactgacgac
tccagtctgttagcgggagggttcgcagactccacagtccgcgtgtggagcgtcacaccc
aagaaattgcgcaaagtcaaatccgcaggagaactgaatgtgattgagaaagagtctgat
gacgttctggagaggatcatggatgagaagacggccagtgagtcgaagatcctccacggt
cacagtgggccggtgtatggtgtcagcttcagtccagacaggaactatctgttgtccagt
tctgaggacggtacagtcagactgtggagcctgcagacgtttacgtgtctcgtggggtat
aaaggacataactatccagtgtgggacactcatttctcacccttcggctattactttgtg
tcaggaggacacgacagagtagcacgcctctgggcgacggatcattaccagcccttgcgg
atatttgctgggcatctggctgacgtcacctgcacgcgattccaccccaactctaactat
gtggccacaggctcgaccgaccgcactgtacgcctctgggacgtcctgaatgcaaactgt
gtccgcattctcacaggtcacaaggggcccatccattctctagcattctcacctaatgga
aagttcctggcatctggatccacagatgggagagttttactatgggatattggacatggg
ctgatgatcggagagctgaagggtcacacagacacaatttatgccctcaagttcagcaga
gacggagaaatcctcgcatcaggttctatggataacaccgttcggctgtgggactccatg
aaggctttcgatgaagtggagactgacgacttcaccgcaacgacgggccacattcacttg
cccgataactcccaggagctgctgctcgggatgtaccacagcaaatccacacctgttacc
cacctgcatttcaccagacgcaacctgctactggccgcaggcgcctacaactcccagtga
DBGET
integrated database retrieval system
