Sinocyclocheilus rhinocerous: 107707769
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Entry
107707769 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: transcription termination factor 2-like
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107707769
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107707769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
AAA_34
PhoH
Motif
Other DBs
NCBI-GeneID:
107707769
NCBI-ProteinID:
XP_016367356
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MERILCETHGNSCLMKTGVKEGPNKGKSFYICTARDATPCNFALPTEIPPSHCLQHEDFM
VELQTLIYNEKQDIYKLFYRCMLGKSEGQKWCGCVPWREKDPEKRTDLSEKDLQSSSLTP
VRNPFKVKTKQDKSSERKRDPDAEKDRGEINGDKRVNGKDQGSAKKKEERSKTTEIEENN
KNGSDGQRGLGREGKDSESWRNKKLPTGIKIKKRVSDDERLRSTAEDGACPESPNXLNES
IQGPSESETSLKHQQEKKPIKTGGSAQSPSKSSSRCDKKASVENETKDDHSNKQSTANSK
SDTDKTQSLQSKSSSPSCSTSQDVPVSEKHTALNVQKTVPNQSQAKDQKGIARFGEWSDE
EDDVQLVSVQPPTQQSAPTPAAPVQKTLTSYPGFQPASKVQGRSEDPRALHSHLTAQLKQ
KKATLSVVNVSALPDKGERLKSQVKELEEALESLSLTTASLSESQDKDKSEAEHKAAHSH
SNPFSRPGGAILLPPAPAPLWKESSGSSLGLNLNQGYSQMFGVNTQSQAFYGGRMTENRL
LAVRNATTEAIDHLHDSLESCPTEDTEAPDPKGIKVELLPHQRRALAWLLWRETQKPCGG
ILADDMGLGKTLTMISLILSQKKKDEKLEEWISKNDSTIVTSQGTLIICPASLVHHWKKE
IDKRVKSSRLSVYLYHGPNRQRSSSVLAEHDVVITTYSLVSKEIPVQKEDAEKPSKDSDH
VATDLPPLLRVAWARVILDEAHNIKNPKVQTSMAVCKLRARSRWAVTGTPIQNNLLDMYS
LIKFLRCSPFDEYKLWKAQVDNGSKRGGERLNILTRALMLRRTKDQLDATGKPLVSLPDR
TCEVHRLKLSEDEQAVYDVVFAQSRSTLQNYLKRHEEGNTKKGDSSNPFEKVAREFGMSP
QEPLSSSQQPQASNTIHILSLLLRLRQCCCHPSLLKKTLDQSELQGDGVALSLEEQLCAL
SLSEPSDSDPKDTVSLNGNRFSSELFQDTRESTKISAILTELREIRKKDQKSVIVSQWTS
MLHIVAVHLEKMGLKFAVIDGTVNPKRRMDLVEEFNTNPKGPQVMLVSLCAGGVGINLIG
GNHLFLIDMHWNPALEDQACDRIYRVGQSRDVTIHRFVCDGTVEDKISSLQEKKKELAQK
VLSGTGSSFTKLSLADLRVIFGV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaattctgtgtgaaacacacggcaattcatgcttaatgaagactggtgtaaag
gaaggaccgaataagggcaaaagtttttatatttgtactgcgcgtgatgcaacaccctgc
aactttgcactgcctacagagatcccaccatctcactgccttcagcatgaggacttcatg
gttgaacttcaaacactaatttacaatgaaaaacaggacatttacaagttgttttatcgc
tgtatgcttggaaaatctgaaggacagaagtggtgtggttgtgttccgtggagagagaaa
gaccctgagaaaaggactgatttgtcagagaaagatcttcaatcctcaagcctcactcct
gtcagaaaccctttcaaagtcaagacaaaacaggacaaatcttcagaacgcaagagggat
ccagatgctgaaaaggataggggagagatcaatggtgataaacgtgtgaacggtaaagat
caaggtagtgctaaaaagaaagaagagcgttccaagacaacagagatagaggagaataac
aagaatgggtcagatggtcaaagggggttgggccgagaggggaaagactcagagtcttgg
cggaacaagaaacttcccactgggataaagataaagaagagagtgtctgatgatgagagg
ctgaggagcacggcagaggacggggcatgtcctgagagtccaaacnntctgaacgaaagt
attcaaggaccgagtgaatccgagaccagcctcaaacaccagcaggagaagaaacctata
aaaacgggcggctctgcacaaagcccttcaaagagctcatctcgatgtgataagaaagct
tcagtagagaatgaaacaaaggatgaccactcaaacaagcaaagcactgctaattcaaaa
tcagatacagataaaactcaaagcctgcagagcaagagcagctcaccctcatgctccaca
tcacaggatgtgccagtttctgaaaaacacacagcacttaatgttcagaagacagtacca
aaccagagtcaggcaaaggaccagaaaggcatagcacggttcggtgagtggagcgatgag
gaggatgatgttcagctggtgtcggtacagcctcccacccagcagagtgctccgactcca
gctgcacctgttcagaaaacactcacctcttatcctggtttccagcctgcttctaaagtc
cagggtcggtctgaggaccccagggccctccacagccatctcacagcccagctcaagcag
aagaaggccactctttcagtggtgaacgtgtcagctctgccagataaaggggagcgtttg
aagagtcaggtgaaagagctggaagaggctctggagtctctgagtctgaccacagcttct
ctgtctgagtctcaagataaagacaaatcagaggcagaacataaagcagcacacagccat
tccaatccattcagtcgtcctggaggcgccatcctactgcccccagctccggctcccttg
tggaaggaatcctctggtagctctctgggtctgaacctgaaccaaggctactcccagatg
tttggagtgaatactcagagccaggctttctatggtggcaggatgactgagaatagactg
ctggctgtccgcaatgccaccactgaggccatcgaccatctgcacgactcgctggagtcc
tgccctacagaagacacagaggcaccggatcccaaaggaatcaaagtagagctgttgcct
catcagaggagagctctggcctggctgctgtggagagagacacagaaaccatgtggagga
attttggctgatgacatgggcctgggaaagaccctcacaatgatctccctcattctgtct
cagaagaagaaggatgaaaaactggaggaatggatctcaaaaaatgattcaaccatagtg
acttctcaggggacattgataatctgtcctgcttctctggtccatcactggaagaaagag
attgacaagcgtgtgaagagtagccgcctcagtgtttatttgtaccatggccccaaccga
cagaggagttcaagcgtccttgctgagcatgatgttgtgatcaccacatacagtctggtc
tctaaggagatcccagtgcagaaggaggatgcagagaaaccctctaaggactctgatcat
gtggccacagacctgcctcctctgttacgtgttgcctgggcccgtgtgattcttgatgaa
gctcacaacattaagaaccctaaagtccagacgtctatggcggtgtgtaagctgcgggcc
cgatcccgctgggctgttactggaacccccattcagaacaacctgctggatatgtattca
ctgatcaagtttctgagatgctctccgtttgatgagtataagctgtggaaggctcaggtg
gataatggctcaaagagaggtggagagagactgaacatcctcaccagagctctgatgctt
cgcaggaccaaagatcagctagatgctactggaaaaccactggtgtctctgcctgatcgg
acctgtgaggttcacaggttgaagctctctgaagatgaacaagctgtatatgatgttgtg
tttgcacagtccaggtccacactgcagaactatcttaagagacatgaggaaggaaacact
aaaaagggggacagtagtaatccttttgagaaagttgcacgagagttcgggatgtctccg
caggaaccgctgtcttcctctcagcagcctcaggcctccaacaccatccacatcctttca
ctgctgctgcgtctcaggcagtgctgctgtcacccgtctctgctcaagaagactctggat
cagtctgagctgcagggggatggtgtagctctgtctctagaagagcagctgtgtgctcta
tctctgtctgagccctcagactctgaccctaaagacactgtgtccctcaacggcaaccgc
ttctcctctgagctcttccaggacactcgtgaaagcactaagatttcagccattctgaca
gaattgagagaaattagaaagaaagatcaaaaaagtgtgattgtgtctcagtggaccagc
atgctgcatattgttgctgttcacttggagaaaatggggctaaagtttgcagtaattgat
ggcactgtcaatcccaaacgcagaatggacctagtggaggagttcaatactaaccctaaa
ggaccacaggtgatgctggtgtctctgtgtgctggaggtgtgggaatcaatctgattgga
gggaatcatctgtttctcattgacatgcactggaatccagcactagaggaccaggcctgt
gatcggatctatagggtgggacaatcccgggatgttacaattcacaggtttgtgtgtgac
ggtacagtggaagacaagatctcttcactacaggagaagaagaaggagctggctcagaaa
gtcttgtctggaactggatcatcatttactaaactgtctctggcagatctcagggtcatc
ttcggtgtgtga
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