Sinocyclocheilus rhinocerous: 107707836
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Entry
107707836 CDS
T04916
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04145
Phagosome
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107707836
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107707836
09144 Cellular community - eukaryotes
04510 Focal adhesion
107707836
09142 Cell motility
04820 Cytoskeleton in muscle cells
107707836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107707836
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srx04147
]
107707836
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107707836
Membrane trafficking [BR:
srx04131
]
Endocytosis
Phagocytosis
Opsonins
107707836
Exosome [BR:
srx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107707836
Exosomal proteins of colorectal cancer cells
107707836
Exosomal proteins of bladder cancer cells
107707836
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107707836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CCN
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
Laminin_G_3
cEGF
EGF
DUF3972
Motif
Other DBs
NCBI-GeneID:
107707836
NCBI-ProteinID:
XP_016367417
UniProt:
A0A673ID27
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MPVDSLINSVDLGMSNNVFLILGEVSWFLAEQSHCGAGNLINVKNLCLVTILIHRRMILR
RCLRMLALLLLYTSVKSQDAQLEDETVFDLFETSGITRKTIGVKLFKGLDSDAPAYRFIR
FDQLPSVSSSALQKLLLQIQNNEGFILTATLRQDRTSCGTILALEGPGERRQFEVVSDGR
TNTLDLVYWWADGSRNVISFEDVDLSDSQWKNVTLYVHGETATLYIGCGLIDSFILDEPF
YEHLSGTGGRMYLAKGATRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPVEVNVVSE
SEEEVEVPSSIATNVIGQNTDVPATSSSELMCERSCEELANLFQELKGLRVVVSNLIDGL
QKVTEENTAMKEALNKMQSLSEQTMCWQDGRMFEDKEDWIVDSCTKCTCQEGKVVCRQIT
CPPVACANPSFIDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCDDTSNAC
SGPSIQTRKCSLGKCGRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQRGGKD
CEGDGRETQICNTDPCPIDGGWGPWSPWTKCSATCGGGLKSRVRECNSPEPQHGGRKCLG
DSIENEVCNRQECPIDGCLSNPCFSGVECITASDGSWECGPCPNGYRGNGTSCEDVNECD
MVSDLCHKVGGLQQCVNTDPGFHCLPCPPRYKGTQPYGMGVESAKTNKQVCEPYNPCKDN
SHSCHKYAECIFLSHFSDPMYKCECRIGYAGDGTICGEDFDLDGWPNQDLVCGANATYHC
KKDNCPTLPNSGQEDFDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDDVGDR
CDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNERDNCPLIYNTDQKDTDLDGVGDQC
DNCPLVHNPQQTDADNDLIGDQCDDNQDIDEDGHQNNMDNCPYIANANQADHDGDGKGDA
CDFDDDNDGIPDDRDNCRLVSNKDQTDSDGDGHGDACENDFDNDKVPDIFDACPENNAIS
VTDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFSGTFY
VNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEEKPSKAFGISGVSLKVVNSTTGTG
EILRNALWHTGNTKQQVRTLWHDPKNIGWKDYSAYRWHLIHRPKTGFIRVVVYEGKQIMA
DSGPIYDKTFAGGRLGLFVFSQEAVFFSDLKYECRDN
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacagcctgataaattcagtggatttgggcatgtctaataatgtattttta
atactaggtgaggtctcctggtttttagctgagcagagccactgtggggcaggtaattta
attaacgtgaaaaatttatgtttggttaccattcttatccatagaagaatgattctccga
cgatgtctccgaatgttggcccttttgcttctgtacacctccgtaaaatctcaagatgca
caactggaagatgagaccgtttttgacttgtttgaaaccagtgggatcacacgcaagact
atcggtgtgaagcttttcaaaggcctggacagcgatgctccagcataccgcttcatccgt
tttgaccagctcccctcagtcagctcctccgcgctacaaaaacttcttttgcagatacaa
aacaatgaaggcttcattctgacagccactctgcgccaggaccgcacatcctgtggcacc
attcttgcactggaaggccccggagagcgcagacagtttgaagttgtttcggacggaaga
actaacactttagatttggtgtactggtgggctgatggctcacgcaatgtgatctctttt
gaggatgtagacctctcggattcacagtggaagaatgtaacactctatgtgcatggagag
acggcaactttgtacattggttgtggacttattgatagcttcattctcgatgaacctttc
tatgaacacctgagcggcacaggtggtcgtatgtatctggccaaaggggccacacgagaa
agccattttaggggcttgctgcagaatgtacgttttatctttgacaccccacttgaggac
attctggagagcaggggatgtgatcttggaaacccagtggaggtgaatgtagtcagcgag
agtgaagaggaggtggaggttccatcttcaattgccaccaacgtgattggccagaataca
gatgttccagcaaccagctcctcagaactgatgtgtgaacgttcctgtgaagaactggcc
aacctcttccaggagctcaagggtctcagagttgtcgttagcaacctcatagatggtctg
cagaaagtgacagaagaaaacacggcgatgaaggaggcactaaataagatgcagagtctt
tcggagcagactatgtgttggcaagatggtcgtatgtttgaggacaaagaggactggatt
gtggatagctgtactaaatgtacctgccaagaaggaaaagttgtttgtcgtcagatcact
tgtcctccagtggcatgtgccaatccatccttcatcgatggcgaatgctgtccagtttgc
cttccaatggacagtgaggatggctggtctccatggtcagagtggactcagtgcacagtc
acatgtggaagtggcactcaacagagggggcgctcttgtgatgacacaagcaatgcatgt
tctggaccctcgattcagacacgcaagtgcagtttgggaaaatgtggccgcagagttcgt
caggacggtggctggagcttatggtctccgtggtcatcctgctcagtgacgtgtggagag
ggactgatcacacgtatccgccactgcaatgctcctgttccacaaagaggtggaaaggac
tgtgaaggtgacggacgagagacacagatctgcaacacagacccctgtccgattgatggt
ggctggggtccatggtctccttggacaaaatgttcggctacatgtggagggggtctgaag
agtcgtgttagggagtgtaacagccctgaaccgcagcatggaggacggaagtgtcttgga
gactccattgaaaatgaagtatgcaaccgacaggagtgtcctattgatggctgtctttcg
aacccttgcttctccggagtcgagtgtatcacagcttctgatggatcctgggaatgtgga
ccctgcccaaatggttaccgtggcaatggaacttcctgtgaagatgtcaatgagtgcgat
atggtatcagatctgtgtcataaggtgggtggcctacagcaatgtgtgaatacagacccc
ggattccactgtctcccctgccccccgcgctacaaagggactcagccctatggcatggga
gtggagtcagctaaaacaaacaaacaggtgtgtgaaccctacaacccctgcaaggacaac
agccacagttgccacaagtatgctgaatgcatcttccttagtcacttcagtgacccgatg
tacaagtgtgagtgccgtattggttatgctggagatggcaccatctgtggagaggacttt
gatctggatggatggcccaaccaagatcttgtgtgtggagcaaatgccacctaccattgc
aaaaaggacaactgtccgactttacccaactctggtcaggaggactttgacaatgatgga
caaggagatgcttgtgacaaagatgatgataatgatgaaattgtggatgaaagggacaac
tgccccctgatgtataatcccaggcagtatgactatgacaaggatgatgttggagaccgt
tgcgataactgcccgtatgagcataaccctgctcagactgacaccgacaacaatggggaa
ggagatgcctgttctattgatatggatggagatgagattctaaacgagcgagacaactgc
cctctcatttacaacacagaccagaaagacaccgatttagatggtgtcggagaccagtgt
gataactgccccttagttcacaacccacaacagacggatgcagataatgatctaattgga
gaccagtgtgatgacaaccaggacatagatgaagatggccatcaaaataacatggataac
tgcccgtacatagccaatgctaaccaagccgaccacgacggagatgggaaaggagatgct
tgtgattttgatgatgataatgatggcattcctgatgaccgggataactgcagactagtt
tccaacaaggaccaaacagactctgatggtgatggccatggtgacgcctgtgagaatgat
ttcgacaatgacaaagtcccggatatcttcgatgcgtgcccggaaaacaatgccatcagt
gtcacagatttccggaagtttcaaatggttcacctcgaccccaagggaaccacgcagatt
gatcccaactgggtggtccgaaaccaaggcaaagagcttgtgcaaactgccaactccgac
cctggaattgcagtgggctttgatgagttcagcgctgtggatttcagcgggaccttctat
gtgaatacagacagggatgatgactatgcaggttttgtgtttggataccagtctagccga
cgtttttacgtagtaatgtggaaacagatcacgcagacgtactgggaagagaagccatca
aaggcgtttggcatctctggcgtctctctcaaggtggtcaactccaccacaggcactggg
gaaattctacgcaatgcattatggcacacaggcaacaccaaacagcaggtgcgcactctg
tggcatgacccgaagaatatcggctggaaagactattccgcctaccgctggcatctcatc
cacagaccgaagactggcttcattagagttgttgtgtatgaaggaaagcagatcatggca
gactcgggccccatttatgacaagacgtttgcaggtggaagactcgggttattcgttttc
tcccaggaggccgtcttcttctctgacctcaaatatgaatgcagagataattga
DBGET
integrated database retrieval system
