Sinocyclocheilus rhinocerous: 107708220
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Entry
107708220 CDS
T04916
Name
(RefSeq) DNA damage-binding protein 2-like isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03420
Nucleotide excision repair
srx04115
p53 signaling pathway
srx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107708220
09124 Replication and repair
03420 Nucleotide excision repair
107708220
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107708220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107708220
03400 DNA repair and recombination proteins [BR:
srx03400
]
107708220
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107708220
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107708220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_Aladin
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_NWD2_C
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
107708220
NCBI-ProteinID:
XP_016367878
UniProt:
A0A673MZ62
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MNVNSKKRPNEEQHQTLSKKLKAKQEGKTASKTETYIQASVKCIGGQKKVGQTSILHYIY
KSSLGQSIHAQLRQCLQEPFVRSLGTYKLHRTASPFDRRVTCLEWHPTHPTTVAVGSKGG
DIILWDYDMLNKRTFIQGKGAGDFIGGMKFCLTDVSKIFVASGDGTVSVQSFEGLQSQIL
SRTPDCGHDHHDLCYWYCCLDVSVSRQMLVTGDNTGRLLLLGLDGHEIFKEKLHKAKVTH
AEFNPRCDWLMATSSVDATVKLWDLRNIKDKSSYIAELPHEKPVNSVYFNPTDSTKLLTT
DQRNQLRVYCSYDWSKPYQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQVLVNDK
RTIDIYDANSGGIVHQLRDPNAAGIISLNKFSPAGDVLASGMGYNILIWNREDTLNSVNR
KQTVEKVEDSGGRPGTSRSQHRTQQHTNRDRRAAADDAKLKKKLSSLSSTETKSKTKSKT
ECKTSKAKKK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaattcaaagaaaagaccgaatgaagaacaacatcaaacactctccaagaag
ctgaaagccaaacaagaaggcaagacagcatcaaaaacggaaacctacatacaagcaagt
gtcaaatgtattggaggtcaaaagaaagtaggccaaacaagtatccttcactacatttac
aaaagctccttgggacagagcatccatgctcaactgcgccagtgtctgcaagagcctttt
gtacgctcacttggaacctacaaacttcaccgcacagcaagtccctttgatcggagggtc
acttgcctggaatggcatcccacccatcccaccactgttgcagtgggctccaagggtgga
gacatcatcctgtgggattatgatatgctgaataagagaaccttcatacaggggaaggga
gctggtgactttataggggggatgaagttctgcctcacagatgtgtccaaaatctttgtt
gcttctggtgatggcacagtaagcgtgcagagttttgagggcctccaaagtcagatattg
tctcgaaccccagattgtggccatgaccaccatgatctttgttactggtactgctgtttg
gacgtgtctgttagtcgtcaaatgcttgtgactggagacaatactggacgacttcttctg
cttggcctggatggacatgagattttcaaagagaagctgcacaaagccaaagtgacccat
gcagaattcaaccctcgttgtgattggctgatggctacatcctctgttgatgctacagtc
aagctgtgggacctcagaaatattaaagacaaaagcagttatatcgctgaattgcctcat
gaaaaaccagtcaattctgtgtactttaatccaacagacagcaccaagctccttactaca
gaccagaggaaccagctcagggtatattgttcatatgactggtctaaaccttatcaaata
attattcatcctcatcgacagttccagcacttaacacccatcaaggcaacctggcatccc
atgtatgacctcatcgtggctggccgttacccagatgatcaagtattagtcaatgacaag
agaactattgacatttatgatgccaacagtggtgggattgtgcatcagctgagagacccc
aatgctgctggtatcatatctctcaacaagtttagtccagctggagatgtgctggcttct
ggaatgggctataacattttgatctggaaccgagaggacacactgaacagtgttaatcgg
aaacagacagtggagaaagtggaggacagtggaggcagacctggaacctccagatcccag
catcgcactcagcagcatacgaatagagacagaagagcagctgctgatgatgccaagctc
aagaaaaagctgtcatcactgtcatcaacagagaccaagtcaaagaccaagagcaagaca
gaatgcaagacatcaaaagcaaagaaaaagtga
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