Sinocyclocheilus rhinocerous: 107708265
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Entry
107708265 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107708265
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107708265
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107708265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107708265
NCBI-ProteinID:
XP_016367939
UniProt:
A0A673NFY1
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESAAPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgacaacgagctgctggattatgaagaggacgaggagcctcaa
ggagccccggagagcgccgctccagtgggcaagaaggaggtgaagggctcttacgtgtcc
atccacagctcgggcttcagagactttctgctcaagccggagctgctgagggccatcgtg
gactgcggttttgagcatccgtctgaagtgcagcacgagtgcatcccgcaggccatcctc
ggcatggatatcctgtgtcaggccaagtctggtatggggaagacagccgtgtttgtgctc
gctaccctacagcagatcgagccggtggatggacaggtgtcggtgctggtcatgtgtcac
actcgtgagctggcgtttcagatcagtaaggagtacgagcgcttctccaagtacatgccc
acggtgaaggtggcagtgttcttcggcggcatgtccataaagaaggacgaggatgtcctg
aagaagagctgccctcacatcgtggtcggcacgccgggacgaatcctcgccctggtccga
aacaaaaccctcaacctgaagaacgtcaagcacttcgttctggacgagtgtgacaagatg
ctggagcagctggatatgagacgtgacgttcaggacatcttcagactgacccctcatgag
aagcagtgcatgatgttcagcgccaccctcagcaaagagattcggcccgtctgccgcaag
ttcatgcaggacccgatggaggtgtttgtggacgatgagacgaagctgactcttcatggt
ctgcagcagtactactgcaaactgaaggacagcgagaaaaaccgcaaactcttcgacctg
ctcgacgtgctggagttcaaccaagtggtgatattcgttaagtctgttcagcgttgtgtg
gcgctttcacagttactggtggagcagaacttccctgccatcgccatccacagaggaatg
gctcaggaagagaggttgtctcggtatcagcagtttaaagactttcagaggaggatccta
gtggccacaaaccttttcgggcgaggaatggatatcgagagggtcaacatcgccttcaac
tacgacatgccagaggactccgacacgtatctccacagggtggctcgtgcgggtcgcttc
ggcaccaagggtttggccatcacgtttgtgtcagacgagactgacgcaaagatcctgaac
gacgtgcaggaccgattcgaggtcaacgtggccgagttaccagaggagatcgacatttcc
acttacattgaacagtccagatga
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