Sinocyclocheilus rhinocerous: 107708582
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Entry
107708582 CDS
T04916
Name
(RefSeq) exosome complex component RRP41-like
KO
K11600
exosome complex component RRP41
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107708582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107708582
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107708582
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
107708582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
107708582
NCBI-ProteinID:
XP_016368331
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MAAPWLQLFFWLASPQESISSPAVKLDQLPDVAEFREVSFQCSGEDISSRNVLPWNTISL
ANGVARYSIRARYGSAALLRKSFTVLTALSASPLACGYLGLDVVTSCCQSRDSVRAAESA
SGLEQGSTKALAVVYGPHETRGSRSKSLHDRAVINCQFSTAERKRRPHGDRKSSEMSLHL
KQTFEAAVLTELYPRSQIDIYVKILQADGGNYSACVNAATLALVDAGIPMRDYVCACTN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccatggcttcaactcttcttttggttggccagccctcaagagagtatttct
tcaccagctgtaaaactggatcagcttcctgatgttgctgaatttcgtgaagtctctttt
cagtgctctggagaggacatcagcagtcgcaatgttcttccctggaacacgatttcattg
gctaatggtgttgcccgatactccataagagcaaggtatggatctgctgctttgctaaga
aaatccttcacagtcctcactgccctttcagcttccccattggcttgtggatatctggga
ctggacgttgtaacgagttgctgtcagagcagggatagcgtccgagctgcggaaagcgca
agcggactggagcagggcagcactaaagcgctggctgtggtgtacggaccgcacgagacg
cgaggctctcgcagtaaatcgctgcatgatcgtgcagtcattaactgtcagttcagcacg
gctgagaggaagagacgtccacacggagaccgcaagtccagcgagatgagccttcatctc
aaacagacctttgaagctgcggtgctcaccgagctctacccacgatcacaaatcgacatc
tacgttaagattctgcaggcagacggtgggaactacagtgcttgtgtgaatgctgctact
ctggctctggtggacgctggtattcccatgcgtgactatgtgtgcgcctgcactaactga
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