Sinocyclocheilus rhinocerous: 107708667
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Entry
107708667 CDS
T04916
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03410
Base excision repair
srx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107708667
03450 Non-homologous end-joining
107708667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107708667
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107708667
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107708667
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
107708667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_lambd_f
HHH_8
BRCT_2
BRCT
RTT107_BRCT_5
HHH_5
LIG3_BRCT
PTCB-BRCT
HHH
DUF2112
Motif
Other DBs
NCBI-GeneID:
107708667
NCBI-ProteinID:
XP_016368446
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MEGHGIMKAFPKVKRPRPNEQKDAPPLKKTPSEPKTGTVFQGTEIYIVPAGIGKSRCDIF
LRQVTQNGGQVVSTFSPSCTHVIVDDSVDCKKALRLLKVERLSSAVHLVKCTWLSACISE
KSLLDPEDYSLLPPESPTVGIAEESNETAVSPVPDVAAAQDPSKILENLTETVPEVQEEH
HEEDGVSQNDLEALISGVHPSESNPTQSLAENPVLSGKWVCSQPSTTKGENHNKHITDKL
EPLAKAYTHTGDKWRALGYSKAINALKSYHKPITSYEEACKIPGIGKRMADKIMEIMESG
HLRKLDHIGEEVPVLEMFTNIWGAGAKTAQMWYQQGFRTLEDIRTKAVLNHTLRIGLKHY
DDLLERMPRSEANAIEKTVCTDFFFFMACSKENSHNQAIKLRGFLCSYHT
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcatggcatcatgaaagccttccctaaagtaaagagacccaggcctaatgag
cagaaggacgcgcctcccctcaaaaagacgccttctgaaccaaaaacaggtacagttttc
cagggaaccgaaatatacatcgttccagctggtatagggaaatccaggtgtgatatattc
cttcggcaggtcacccagaatggaggacaggtagtttccaccttctctcccagctgcaca
cacgtcattgttgatgattcagtcgattgtaagaaagctttgagacttctgaaagtggaa
agactgtcctctgctgttcatctggtcaaatgcacttggttgagtgcctgcatcagtgag
aaaagtttactagaccctgaagactacagccttcttcctcctgagagtcccacagttggt
attgctgaggagtcaaatgagacggcagtcagcccagttccagatgtagcagcagcacag
gatccttcgaaaatccttgaaaatctcacagagacggtgccagaggttcaggaggagcac
catgaggaagatggtgtatctcagaacgatctggaggccttgatcagcggcgtccaccca
tctgaaagcaacccgactcagagtttggcagagaatcccgttttgtctgggaagtgggtc
tgttcccaaccatccacaactaaaggggagaaccacaataagcacattactgacaaactg
gagccgctggccaaagcctatacgcacacgggcgataaatggagagctctgggatactct
aaagcgatcaacgccctcaagagctaccacaagcccatcacttcatatgaggaagcatgt
aagatcccaggcattggtaaacgcatggcagacaagatcatggaaattatggaaagtggg
cacttgcgtaaactggatcacattggggaggaggtgcctgttcttgaaatgttcactaac
atctggggcgctggggccaagactgctcagatgtggtatcaacaaggatttcgcacattg
gaggatattcgcactaaggcggttttgaatcacactctaaggattggactaaaacactac
gatgacctccttgagcggatgccaagaagtgaagcaaatgccatcgagaaaactgtttgt
acagacttttttttttttatggcctgcagtaaagaaaatagccataaccaagcaattaaa
ctgaggggctttctttgttcttaccatacataa
DBGET
integrated database retrieval system
