Sinocyclocheilus rhinocerous: 107709013
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Entry
107709013 CDS
T04916
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03020
RNA polymerase
srx04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107709013
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107709013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107709013
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107709013
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107709013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107709013
NCBI-ProteinID:
XP_016368895
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MVKEQFRETNVAKKISHICFGMKSAEQMRQQAHIQVVTKNLYSQDTSHTPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSHILLSKE
EKLQFLDYLRRPGLAYLQKRGLKKKISDKCRKKTTCVHCNAFNGPVKKCGLLKIIHEKYK
TTKKVVDPMVSDFLQSFDITIEHNKEVESLLTRAQENLNPLVVLNLFRRIPNEDVPLLLM
NPESGKPTDILTCLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSGA
KTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFMQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVRNGPDVHPGANFI
QQRHMQMKRRALILKELSVIRDHAGSACLRELDKSNSPLIMALCGSKGTIRTSLMDLRRR
LVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFRRVLDNIRSVHSC
PGEPVLSRNELILTSDSIMKRKDFLCCKDTFLEEIRKFIKTVSEKIKKTRDKYGINDNGT
TEPKVLYQLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFH
FAGVASMNITLGVPRIKEIINASKNISTPIISANLDTVDDPDFARLVKGRIEKTLLGEIS
EYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYAICTSKLRVKPGDIAVHGEAVVC
VTPRENSKSSMYYVLQSLKQELPKVVVQGIPEVARAVIHIDEQSSKQKFKLLVEGDNLRA
VMATHGVNGNRTTSNNTYEVATVRDTHTLIKLFTFLNVPSANGSVSECIIMGIPMNIGTG
LFKLLHSATKKPNPPRRPLLFDSPDFHIPLAL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacgaatgtggccaaaaagataagtcacatctgtttt
ggcatgaagtcagcagagcagatgagacaacaggctcatattcaggtggtcaccaagaac
ctgtacagccaagacaccagccacacaccgctgcagtatggagtcctggaccaccgcatg
ggaaccagcgagaaggacagaccgtgtgaaacctgcgggaagaacctggccgactgtctc
ggtcactacggctatctggacctggagctgccctgctttcatgtcggatacttcaaagcc
attattgggatcctgcagatgatctgtaagacgtgttctcacatccttctcagcaaagag
gaaaagcttcagtttctggattacttgcgtagacctggactggcgtacctgcagaagcgc
ggcctcaagaagaagatctcagacaaatgcaggaagaagaccacctgtgtgcattgcaac
gcatttaacggccctgtgaagaaatgtggcttgctgaagatcattcatgagaagtacaag
accacaaagaaggtcgtcgatcccatggtgtcagatttcctccagtcgtttgatatcacc
atcgagcacaataaagaagtggagtcactactgaccagagcacaggaaaacctcaatcct
ctggtcgtgttgaatcttttccggaggattccgaacgaggacgttcctcttctgctgatg
aatcctgaatccgggaaacccactgacatcctgacatgcctgttagtgccgcccctctgc
atccggccctccgtcgtcagcgacctcaagtcaggcaccaatgaggatgatctgaccatg
aagttaacggagatcatcttcctcaatgatgttatcaagaagcaccgcatgtcaggagcc
aaaacccagatgatcatggaggactgggacttcctgcagctccagtgcgctctctacatc
aacagcgagctgtcgggcatcccgctcaatatggcacccaagaaatggacccgcggcttc
atgcaaagactcaagggaaaacaggggcggtttcgtggtaacctgtctggaaagagagtg
gatttctcaggcagaacggtcatctctcccgacccgaacctgaggatcgatgaggtcgct
gtaccggtgcacgtcgccaaaatcctcacctacccagagaaggtgaataaagccaacatt
gagctgatgaggaaactggtgcgtaacggccctgacgttcatccgggagcaaattttatt
cagcagagacacatgcagatgaagaggcgcgcattaatcctgaaggagctgtccgttatc
agagatcacgctggcagtgcgtgtttgagagaactggacaaaagcaacagtccactgatc
atggctctgtgtggatccaaaggtaccatcagaacctccctaatggacctcagaaggcgt
ctggtgaagtctctggaggacttgtgctctcagtacgatctgacggtgcgcagctccacc
ggtgacatcatacagttcatctacggcggagacggactcgaccccgcggccatggaggga
aaagacgaaccgctagagttcagaagagtcctcgacaacatcagatcagtgcacagctgt
ccaggtgaacctgtgctgagcagaaacgagctgatcttaacctccgactccatcatgaag
agaaaagacttcctgtgctgtaaagacacgtttctggaggaaatcagaaagttcatcaaa
acggtttcggagaaaatcaaaaagacacgcgacaagtatggcatcaacgacaacggaacg
acagagcctaaagttctgtaccagttggacagaatcactccgacccagctggagaagttt
ctggaaacctgcagggacaaatatatgagggcgcagatggagccgggctctgccgtcggg
gcgctgtgtgctcagagcatcggggagccggggactcagatgaccctcaagacgtttcac
ttcgctggagtcgcttccatgaacatcactctgggagtcccgagaatcaaagagatcatc
aatgcgtccaagaacatcagtacgcccatcataagtgccaacctggataccgttgatgac
ccagacttcgctcggctggtgaaaggacgcattgagaaaactctactgggagagatttcc
gagtacatcgaggaggttttcctgcctgatgattgtttcatcctggtgaagctgtcgcta
gagaggattcgtcttctgaggttggaggtgaacgcagagacggtgcgttacgccatctgt
acgtcaaagctgcgggtgaagccgggcgatatcgcggttcacggagaggccgtggtctgt
gtgactccgagagaaaacagcaagagctccatgtattacgtcctgcagtcgctcaaacag
gagcttcctaaggtggtggtccagggcatccctgaagtggcgcgtgccgtcattcacatt
gatgaacagagcagcaaacagaagttcaaactgctggtggagggagataatctcagggct
gtcatggcaacacacggcgtcaacggcaacagaacaacatctaacaacacgtatgaggta
gcgacagtcagagatacacacacactgatcaagctgttcactttcctcaatgttccttct
gcaaacggcagtgtctctgagtgcattataatgggaatccccatgaacatcggcactgga
ctctttaaactcttacacagcgccacgaagaagcccaatcccccgcgcaggcctttgctc
tttgacagtcctgatttccacatccctctggccttataa
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