Sinocyclocheilus rhinocerous: 107709048
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Entry
107709048 CDS
T04916
Symbol
pcdh9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107709048 (pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107709048 (pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107709048 (pcdh9)
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107709048 (pcdh9)
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107709048 (pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
MAP17
RCR
UTP20_C
Baculo_11_kDa
EphA2_TM
DUF6377
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
107709048
NCBI-ProteinID:
XP_016368926
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MTDLNISHMNSATAATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSF
EDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIP
SATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKV
EDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGAN
AEIKYMFGAQVSPATRRLFALNSTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATI
TINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIE
KDVPFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDEND
NPPIFTQPVIELAVMENNQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVL
TASRVFDREEQERFLFTVTARDNGTRALQNQAAVIVTILDENDNSPKFTHNHFQFFVSEN
LPKYSTVGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFD
VRAVDNGSPPCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVD
GDTGMNAELKYTIVSGNTRSLFRIDPVTGNITLEEKPTVADIGLHRLVVNISDLGYPKSL
HTLVLVFLYVNDTVGNSSYIHDLIRRTMETPLDRNIGESSETYQNVDNLKTIIAIVTGAM
VVIVVIFITVLVRCRNASQFKAAQRKKQGTEWMSPNQENKQNKKKKRKKRKSPKSSLLNF
VTIEENKPDDSAHEPINGTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASP
QSAFHLKADTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKS
KGAPLHTRQGTLTRARTELNPDYLDLRSRAELNPEYWTPCTPLIES
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttgaacatctcccatatgaactctgccactgcggctaccagtaatctggtt
taccgacttgtgtcgaaagcaggtgacaccccactacttagagtgatgagcaatacagga
gaaatatttaccacctccaatcgtatcgacagggagaaactctgtccaggcccctctttt
gaagacagcgagtgttcctttgaaattgaggtggtcattttgcccaatgactatttcaga
ttaatcaaaattaaaatcattgtcaaagacaccaatgacaatgcccccatgttcccctcg
cctgtgatcaacatttcaattccggaaaacacactcatcaacagccgctttgctattccc
tctgccactgatccagataccggacccaacagcgtacacaaatacgagctgttgaacggg
cagagcgccttcggtttggatattgtggagacaccagagggtgagaaatggcctcagctt
atcgttcagcagaatttagatagagaacagaaagatacttatgtgatgaaagtcaaagtg
gaggatggggggaacccacagaaatccagcactgccattctacaggtgactgtcactgat
gttaatgataaccggcctgtcttcaaagaaagccaaatcgaggtccacatcccagaaaat
tctcccgtcggcacatctgtagttcagctgcaagccactgatgcagacgtgggtgccaat
gcagaaataaagtacatgtttggggcccaggtgtctccagcgacacggagactttttgct
ctgaactccaccactgggctcataacagttcaaaggccgcttgatagagaggagaccgcc
attcataaactcacagtactagccagcgatggaagctcgagtccagcaagagccaccatc
actatcaatgtgactgatgtgaatgacaatgctccaaacattgacctgagatacatcatc
agtccaactaatggtactgtaatgctttctgaaaaagatccaattaacaccaagattgcc
ctcattactgtatctgacaaagacacagacgtcaacggcaaggtgatttgcttcattgaa
aaagatgttccatttcacctcaaagcagtttatgataaccagtatttgttagaaacatct
gcactgcttgattatgaaggaaccaaggagtatatcttcaagattgttgcttctgactct
ggaaaacctagtctgaaccagaccgccctggttagagtacggctggaggatgagaatgac
aatccacccattttcacccagcctgtcattgagctggctgtcatggagaacaaccaacgt
gacatgttcctgacaaccatcagtgccacagatgaggacagtggacggaatgcagagatt
gtctaccagcttggacccaacgcatcattttttgatcttgaccgcaaaacaggagtgcta
accgcatccagggtgtttgatagggaggaacaagagcggttcctctttacggtcaccgct
agggacaatggcaccagggctctgcagaatcaagctgcagtcatagtgaccatactggac
gagaatgacaatagccctaaatttacacacaaccactttcaattctttgtgtcagagaat
ctgcctaaatatagtacagttggagtaatcacagtcacagatgcagatgctggtgagaat
gccgtggtgagactctcaatccttaacgataatgagaacttcatccttgacccagattct
ggagtcataaagtccaatgtatcctttgaccgagagcagcaaagctcctacacctttgac
gtcagagctgtggacaatggaagccctccatgttcgtcagctgccaaggtgaccatcaat
gtcattgatgtcaatgataacccccccatcgtcatctacccaccatcaaacacctctttc
aaactagtgccactgtctgcgattccgggatcggttgtggccgaggtgtttgcagtagat
ggcgatacaggtatgaatgcagagctcaagtacactattgtgagtggcaacacaagaagt
cttttcagaattgaccccgtaacaggaaacatcacgttagaggagaaacccactgtggca
gacattggcctccacaggctggtggtcaacatcagtgacctaggctatccaaagtccctg
cacactcttgtcctagttttcctgtacgtaaacgacacggttggaaattcctcatacata
catgacctcatccgtcggacaatggaaacgccactggataggaacattggcgagagcagt
gagacttatcagaatgttgacaacctaaaaaccatcattgccattgtgacaggcgctatg
gtagtgattgtggtcatcttcataacagttctggtgcgctgccgaaacgcctcacagttc
aaggcggctcagagaaagaagcagggtaccgagtggatgtcccccaaccaggagaacaag
caaaacaagaaaaagaagcgcaaaaagaggaagtcgccaaagagctccctcttgaacttt
gtcaccatcgaggagaacaaacccgacgactctgcccacgaacccataaacggaaccatc
agtctcccggctgagctcgaggagcccgggattggacgctttgattggaatgccacccct
actaccaccttcaagcccagcagcccagacttggcccggcactacaagtccgcttcaccc
cagtcggccttccacctcaaagctgacactccggtgtctgtgaaaaagcatcatgtgata
caggagctgccactggacaatacctttgttgggggctgtgacacgctttccaaacgttcc
tccaccagctccgatcacttcagtgcctcagaatgcagttcacaaggaggcttcaagtca
aagggggcacctttgcacaccagacagggaacgcttacccgcgcccgcaccgaactgaac
cccgactatctggaccttcgctctagagccgagctgaacccagagtactggacgccctgc
actcctctaattgaaagttaa
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