Sinocyclocheilus rhinocerous: 107709289
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Entry
107709289 CDS
T04916
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
srx03083
Polycomb repressive complex
srx04110
Cell cycle
srx04330
Notch signaling pathway
srx04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107709289
03083 Polycomb repressive complex
107709289
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107709289
04350 TGF-beta signaling pathway
107709289
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107709289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107709289
Enzymes [BR:
srx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107709289
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107709289
HDAC complexes
Sin3A-HDAC complex
107709289
BRAF-HDAC complex
107709289
REST complex
107709289
SHIP complex
107709289
MiDAC complex
107709289
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107709289
Heterochromatin formation proteins
Other heterochromatin formation proteins
107709289
Chromatin remodeling factors
NuRD complex
107709289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107709289
NCBI-ProteinID:
XP_016369235
UniProt:
A0A673LF73
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLFSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPDKRISIRAHDKRIACDEEF
SDSEDEGQGGRRNAANYKKPKRVKTEEEKDGEEKKGEPTDVKEEEKASEEKMDTKGPKEE
LKTV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagttctcaaggaacaaagaagaaagtttgctattattatgacggggatgtt
gggaattactactatggccagggtcatcccatgaaaccccacagaatccgcatgacccac
aacctcctgctcaactatgggctgtataggaaaatggaaatttatcggcctcataaagcc
aatgctgaagaaatgacgaagtatcacagtgacgattacatcaagttcctcttttccatc
cgcccagacaacatgtctgagtacagcaagcagatgcagagatttaacgtaggggaggat
tgtcctgtctttgacggcttatttgagttctgtcagctctcaacaggtggatctgttgct
ggggctgtgaaactcaacaaacagcagacagacattgccattaactgggcaggaggcctt
catcatgccaagaaatctgaggcatctggattctgctatgtcaacgacattgtactcgcc
attctggagctgctcaagtaccatcaaagagtgctttacatcgacattgacattcatcac
ggggatggagttgaggaagctttctacacaacagaccgtgtcatgactgtgtccttccac
aagtatggagagtatttccctggtactggagacctcagagatattggtgcagggaaggga
aaatactatgcagtgaattacccactcagagatggtatagatgatgagtcatatgaagcc
atattcaaacctatcatggccaaagtgatggagatgtaccaacccagtgctgtggtgctc
cagtgtggcgctgactctctgtctggagatagattgggctgctttaacctcaccatcaaa
ggtcatgctaagtgtgtggagtacatgaagagctttaacctgcccctgctcatgctggga
ggtggaggctacaccatcaggaacgtggcccgctgctggacctatgagacggctgtagcg
ctggacagcactattcccaacgagctcccgtacaatgactattttgagtattttggacct
gatttcaagcttcacattagcccctccaacatgaccaatcagaatacaaatgactatctt
gaaaagatcaaacagcgtctgtttgagaatctgcggatgttgcctcatgccccaggggtt
cagatgcaggcgatcccagaggatgctgttcaggaagacagcggagatgaggaggacgac
cctgacaaacgcatctccatccgtgcccatgacaagcggatagcctgcgatgaggagttc
tcggactccgaggacgaaggacagggcggccggagaaatgcagctaattacaaaaagcct
aagcgagtgaagactgaagaagagaaggatggagaagagaagaaaggtgagccaacagat
gttaaagaagaagagaaagcttcagaagaaaaaatggacacaaaggggccaaaagaagag
ctaaaaacagtctga
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integrated database retrieval system
