Sinocyclocheilus rhinocerous: 107709417
Help
Entry
107709417 CDS
T04916
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107709417
03036 Chromosome and associated proteins [BR:
srx03036
]
107709417
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107709417
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Pre-60S particles
Helicases
107709417
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107709417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107709417
NCBI-ProteinID:
XP_016369364
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSICPTTSKMPSKILPVADQSALMEEVESGPPLLKKKKKKMKEQKQMADECDSPTPKKRK
AEKMPTESTDTNGNTDTIQIKLKKKKKKAANVEDVMGNGEPDKACVSAVDTPGPSSEDSD
SEREKETPEQKEGAFSNFRISQNTITLLRARGVSYLFDIQVKTFNSVYDGKDVIGQARTG
TGKTFSFAVPLVEKLQSAAEDRRRGRAPKVLVLTPTRELAIQVAKDFKDVTRRLSVTCFY
GGSSYNPQLEAIRNGIDVLVGTPGRIRDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQV
EEILSLSYKKDAEEKPQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQKAATTVEH
LAIACHWSQRASVIGDVVQVYSGSHGRTIVFCETKRDATELSMNTSIKQSAQSLHGDIPQ
KQREITLKGFRSGTFEVLVATNVAARGLDIPEVDLVIQCSPPNDVESYIHRSGRTGRAGR
TGICICFYQRKEESQLKFVEQKAGITFKRVGVPTANDIIQSSSKDAVRFLDSVPAVAVGY
FREAARELIEQRGAEEALAAALAHISGATSLEQRSLISSDAGFSTMILNCSQEMHNIGFA
WRGLKEQLGEGIDEHIKRMTFLKGRTGVCFDVPASKVKEMQDSWQDGGRWQLSVATELPE
MEQSMRQSSERSSGGFGGRGRRSFGFRGNNGSGGRRARGGGAAQKRSFSQAFDY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctgccccacaacatctaaaatgccgtctaagatcctgcctgtagccgaccag
agcgcactgatggaggaggtggagagcggcccgccgctgctgaagaaaaagaaaaagaaa
atgaaagaacagaagcagatggcagatgagtgtgattcaccgactcctaagaagaggaag
gctgagaagatgcccaccgagtccacagacacgaacggaaacacggacacaatccagatc
aagctgaagaagaagaagaagaaggcggcaaatgtggaggacgtgatgggcaacggagag
cctgataaagcatgtgtgtcagctgtagatacgcctggaccgtccagcgaggactcagac
agcgagcgagagaaagaaaccccggagcagaaagaaggagccttctccaacttcaggatc
tcgcagaacaccatcacactgctgcgggcccgtggtgtttcgtatctcttcgacatccaa
gtgaagacctttaactcggtgtatgatgggaaggatgtcattggccaggcgaggaccggc
acggggaagaccttctcgttcgctgtccctctggtggagaagctgcagtccgcagcggag
gacaggagaagaggccgggccccaaaggtcctggttctgacgccgactcgtgagctcgcc
attcaggtggccaaagacttcaaagacgtcaccaggagactgtctgttacgtgcttctac
ggaggaagctcatacaacccacaactggaagcgatccgcaatggcatcgatgtactggtg
ggaacgccgggtcgaatccgagaccatctgcagaataacaagctggatctgtctcagctg
aagcacgtggtgctggacgaggtggaccagatgctggacatgggcttcgccgagcaggtg
gaggagatcctctctctgtcctataagaaagatgcagaggagaagccgcagacgctgctg
ttctcagcgacgtgtccctcctgggtttacgacgtggccaagaaatacatgcgctctcag
ttcatccatgtggatctcatcgggaagaagacccagaaagccgccaccacagtcgagcac
ctggcgatcgcgtgtcactggtctcagcgggcgtcagtcatcggcgacgtcgttcaggtg
tacagcggcagccacggccggaccatcgtcttctgcgagaccaagagagacgccactgag
ctctccatgaacacatccatcaaacagagcgcgcagtcgctgcatggagacatccctcag
aagcagagagagatcacgctcaagggcttcaggagcggcacgttcgaggtgctggtggcc
actaacgtagcggcccgcggcctggacatccccgaggtggacctggtcattcagtgctct
cctccaaacgatgtggaatcatatatccaccggtctggacggaccggcagagctggaaga
acgggcatctgcatctgtttttaccagcgcaaggaggagagccagctcaagtttgtggag
cagaaagcgggaatcaccttcaaacgggtcggggtcccgacggccaacgacatcatccag
tcctccagtaaagacgccgtgaggtttctggactcggtcccggccgtggcggtggggtat
ttccgcgaggcggcgcgtgaactgatcgagcagcgcggggcggaggaggcgctggcggcg
gccctcgctcacatatcaggagccacaagcctggagcagaggtccctcatcagctccgac
gccgggttctccaccatgatactgaactgctctcaagaaatgcacaacatcggtttcgcc
tggcgcggcctgaaggagcagctcggggagggaatcgatgagcacatcaaacgcatgacc
ttcctcaagggcaggacgggtgtgtgtttcgacgtcccagccagcaaagtgaaagagatg
caggacagctggcaggacggcgggcgctggcagctgagcgtggccacagagctccccgag
atggagcagagcatgcggcagagcagcgagcggtcctccggaggcttcgggggacgagga
cgccgctcctttggcttcagaggcaacaacggctccggcggcagaagagcacgaggagga
ggcgctgctcagaaacgcagcttcagccaggccttcgattactga
DBGET
integrated database retrieval system
