Sinocyclocheilus rhinocerous: 107709449
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Entry
107709449 CDS
T04916
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107709449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107709449
03016 Transfer RNA biogenesis [BR:
srx03016
]
107709449
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107709449
Transfer RNA biogenesis [BR:
srx03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107709449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107709449
NCBI-ProteinID:
XP_016369412
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MFSGYQERDDYEDELYRDDADSSLSDTDSELEFRLYSQLHYSAEIQEDREDSREVQSSVP
RTQTQQKSLPHAPPVDVIVIDSGTDAITVSDSSEEDDSVCTKKGQSSKRWNRKLQTHSLL
SPSLPQVQARRSSPDDVVVLDSDSDDSSSESAPPFVEDLDSDSDGPENWMILGQDKQDGD
QNIQLNISLPEHANDEENKQIWAVSEKDKEAQISNKGFGPRRVSNRYYNEKSITCHNCKK
SGHLSRNCPAPKKVSCCSLCGLQGHFLRICPNRYCSNCSLPGHTNDNCLERAYWHKRCHR
CDMTGHFFDACPEIWRQYHITTTNGPLCKASDPEACRKPAYCYNCSKKGHFGHECTEKRM
YNGTYPTLPFISRYDTKNDIHYREIRVKKQARELKQAGLISPDRAVITNTPQPPRKKQKT
SHKQSPYPYNTHTNNQNTPKRRIAHTPRHTYFNVKQNSETPGNHGKHTPKSKLKPQEQSQ
NEAKKKKKKTQSEIVLDEDADIPRGYKKSPHKTRDVSSPRKANVKPNKPFGMEKNNKKDK
LSKKKERKWQKRERKAAKDSSMYPSDENLFQIKQRKHPSSTTNGMTLGAGLSVWPTNG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagggtatcaggagcgggatgactacgaggacgagttgtaccgggatgatgca
gactcgagtttgtctgacactgacagtgaactggagttccggctttattcccagctgcac
tacagcgctgagatccaggaggaccgggaggactcgagagaggtccagtcatcagtacca
cggactcaaacacagcagaaatccttgcctcatgctccacctgtagatgttattgtgatt
gactctggcacagatgctatcacagtgtcagacagctctgaggaagatgacagtgtctgt
actaaaaagggtcaatcatcaaaacgctggaacaggaagttgcagacccatagcttgctt
tcaccctctctaccacaagttcaagcaagaaggagctccccagatgatgttgttgtgttg
gattctgattcagacgacagctcttctgaatctgcacctccttttgtggaggatctggat
tcggactcagatgggccggagaactggatgattctgggccaggacaaacaggatggagat
cagaacatccagctcaacatctccttaccagaacatgcaaatgatgaagagaataaacag
atctgggctgtatcagaaaaggataaagaggctcagatctctaataaagggtttggcccg
aggcgtgtttcaaaccgttactacaatgaaaaatccatcacgtgtcacaactgcaaaaag
tccggccatctctccagaaactgccctgcaccaaagaaggtgtcatgctgctcattatgt
gggcttcagggacactttctgaggatctgtccgaaccgttactgttctaactgctcactg
cccggccacaccaatgacaactgtctggagagagcttactggcacaaacgctgccaccgc
tgtgacatgaccggacatttctttgacgcttgcccagaaatctggagacagtatcacatt
acgaccactaatggacccctctgcaaagccagtgatccagaggcctgcaggaaacctgcc
tactgttacaactgctctaagaaaggacacttcggccatgaatgcaccgagaagagaatg
tataatgggacatatcccaccctgccatttatttcccgttacgacacaaagaatgacatc
cattaccgggaaattcgagttaaaaagcaggccagagaacttaagcaagccggattgatt
tcacctgacagagctgtcattacaaataccccccaaccgcccaggaagaaacaaaaaacc
agccacaaacagtctccatacccatacaacactcacaccaacaaccagaacacgccgaag
agacgcatcgcgcacacacccagacacacatacttcaacgtcaagcagaactcagaaacg
ccaggaaaccacggcaaacacacccctaagagcaagttgaaaccgcaagagcaaagccag
aatgaagccaaaaagaagaaaaagaaaacacaatctgaaattgttttagatgaagatgca
gacattcctagaggttacaaaaagagccctcacaagaccagagacgtttcatcaccacgg
aaagccaatgtgaagccgaataagccttttggaatggaaaagaacaataaaaaggacaaa
ctatcgaaaaagaaggagaggaagtggcaaaagagagaacgaaaagctgcaaaagattct
tccatgtatccttccgatgaaaacctttttcagattaagcaaagaaagcatccctccagc
acaaccaatggcatgacgttgggggcggggctatcagtttggccaaccaatggctga
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