Sinocyclocheilus rhinocerous: 107709616
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Entry
107709616 CDS
T04916
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107709616
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107709616
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107709616
Membrane trafficking [BR:
srx04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
107709616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
zf-Tim10_DDP
Motif
Other DBs
NCBI-GeneID:
107709616
NCBI-ProteinID:
XP_016369626
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MSSNQGSSPIPQSSGGTSDGLFRKPRDPSMAPRHYRTPRSLPDVCPKEPTGEGRGLCDGP
SVVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFTETDVMPSFYLPNISRE
HFSSYLQETAQREKIHERCKNICLNKDDLSVPTITNNHDKARAELEQVPKIFMKPEFVLN
DPATFNAVLPWSHFSVAGGMNSRDVASSRLLQEKLSHYLDVVEVSIARQISLRSEAFFHA
MSSQHELQDRLRETADAVAKLRASTAAIDRVMCRGPLRALRDTLTRNNCIKLHNKLKLMA
AVHQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLASQLCEMERLIDKMM
VADFSTYTQSDLNRAFEEDRQVLEKVTEQPAASGKDRLQSLVFGLLRQRKLDFLDIYSEE
MIRAAKNIVRQCVVKSVLQISEIDADTVKLHEQMRLMTFHQWFDLLLDIFEHFILFLKRI
KATLSVIRNVVLEVLDSSQRSRLADVSLATNHSDGRTNEDEEDESGGPALHSGEAELAYL
THEGLFISDALNEAEQRSNAAAHAQLRAQTHMETCGSDSASATTESSSSREHNSNTTSSL
PIGGAAVISEDVMPSDLELSRVANNVQELLYTASDVSHDRCVKVLMTRAKDGSLERLSSS
EFVCLSQAVESFARDTEELCGRRSMSLRGALQSQANRFVQRFHEERKTKLSLLLDNERWK
QAEVPAEFQDLVDSIADGRITLPERKPTGSEDRKPSEFLCVDGQKYAVVGTVLLLIRMFL
EYCQCVNDIPSITTDILTRLADQLKHFNSCSCQLVLGAGALQVVGLKTITTRNLALASRC
LQLVLHYIPVIRAHFETRLQPRQYSILRHFDHITKDYNDHIAEISAKLVAIMDSMFEKAL
SKYEVKAPMPSACLRNVCKQMAKMHEAIYELLPEEQTQMLFLRINASFKLHLKRQLARLG
VVNDGGPQYGLVMVDVAFYSENVQALRSLEHLDLNMPETWEQKR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaatcagggctcgtctccgatccctcagtccagcggcggcaccagcgatggg
ctcttccggaagcccagggacccttcgatggcccccagacactatcgaacgccgcgctcc
ttaccagacgtctgccctaaagagcccaccggcgagggtcgtggtctctgtgacgggccg
tccgttgtggccgaccagcaccgctggactgtgtataactctaaagtgaacctccccgcg
gccctgaacgaccccaggctggccaagagagagtcggacttcttcactaagacgtggggc
ctggacttcaccgagaccgacgtcatgccttcattctacctgcccaacatcagccgagaa
cacttcagctcctacctgcaggagacggctcagagggagaagattcacgagcgctgtaag
aacatttgcctgaacaaagacgatctgtcagtgcccaccatcacaaataatcacgataaa
gccagagctgaactggagcaggtgcccaagatcttcatgaagcctgagtttgtgttgaat
gatccagccacgtttaacgccgtgttgccatggtcgcacttcagcgtcgccgggggcatg
aacagccgagatgttgcgtcgtcacggttactgcaggaaaagttgagtcactatctggac
gtggtggaggtgagcatcgctcggcagatctctctccgctccgaggcttttttccacgcc
atgtcgtcgcagcacgagctccaggaccgtctgcgagaaacggccgacgctgtggccaag
ctccgcgcgagcaccgccgccatcgaccgtgtgatgtgccgagggccgctgcgagcgctg
cgcgacactctgacccgcaacaactgcattaagctacacaacaaactcaagctgatggct
gccgtgcaccagacgcagcccacggtgcagctgctcctttccacctcagagttcgtgggg
gcgctggagctcatcgctaccaccaaagaagtgctgcagcaggaactgcaggggattcac
agcttcagacatttggcttctcagctctgtgagatggagaggttgatcgataagatgatg
gtggccgatttctccacgtacactcagagcgatctcaatcgagcctttgaggaggacagg
caggtcctggagaaggtcacagagcagcctgcagcatcaggaaaggatcgcttgcagtct
ctggtctttggcctgttgagacagaggaagctggatttcctggacatctacagcgaggag
atgatccgagccgccaagaacatcgttcgacagtgtgttgtgaagtctgtgttgcagatc
agtgagatcgatgcagacactgtcaaattacatgagcagatgcgcttgatgacgtttcat
cagtggtttgatctgctgctggatatttttgaacacttcatcctgttcctcaagaggatc
aaggctacgctcagcgtcatccgcaacgtggtgctggaggtgctagacagcagccagagg
agtcggctagcagacgtttccttggcaaccaatcattctgatggcaggaccaatgaggat
gaagaggatgagtctggaggccccgcccttcattcaggagaggcggagctcgcgtatctc
actcacgaggggctgttcatcagcgatgcgctgaatgaagcggagcagcgcagtaacgcg
gcagcacatgcgcagctgagagcgcagacgcacatggagacctgcgggagcgactcggcc
tccgcaaccaccgaatcttcctccagcagggaacacaactccaacactacctcctccctg
cccatagggggcgctgctgtgattagtgaggacgtcatgccgtctgatctggagttgagt
cgggtggccaataacgttcaggagctgctgtacacggcgtcagacgtcagtcatgaccgc
tgcgtcaaagtgctcatgacccgagccaaggacggctctctggagcgcttgagctcgtca
gagtttgtgtgtttgagtcaagcggtggagtcgttcgccagagacactgaggagctgtgt
ggccggcgcagcatgagcctgaggggggcgctgcagagtcaggccaaccgcttcgtgcag
cgcttccacgaggagcgcaagactaaactcagtctgctgctggataatgagcggtggaag
caggccgaggtcccggctgagtttcaggatctggtcgactccatcgctgatggacgcatc
acactgcccgagcgcaaacccacagggtctgaggacaggaagcccagtgagtttctgtgc
gtcgacgggcagaagtacgctgtggtcgggacggtgctgctgctgatccggatgtttctg
gagtactgccagtgtgtgaatgacattccctccatcaccactgacatcctcacgcgcctc
gccgaccagctcaagcacttcaattcttgcagctgtcagctggtgctgggggcgggagct
ctgcaggtggtcggcctgaaaaccatcaccaccagaaacctggctctggcgtctcgctgt
cttcagctggtgcttcactacatccctgtgatcagagcacactttgagaccagactgcag
cccagacagtacagcatactgagacacttcgaccacatcaccaaggactataacgatcac
atcgcagagatctctgccaaacttgtggccatcatggacagtatgtttgagaaggctctg
tctaagtatgaggtgaaggcgccgatgccgtctgcgtgtttgcgtaacgtgtgtaaacag
atggccaaaatgcacgaggccatttatgagctgttaccggaggagcagacgcagatgctg
ttcctcaggataaacgccagctttaagctgcatctgaagagacagttagcgcggctggga
gtcgtcaatgatggcggacctcagtatgggttggtgatggtggacgtggcgttttactct
gagaacgtgcaggctctgcgctctctggagcatctggacctaaacatgccggagacctgg
gagcagaagaggtga
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