Sinocyclocheilus rhinocerous: 107709671
Help
Entry
107709671 CDS
T04916
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107709671 (dcaf13)
04121 Ubiquitin system [BR:
srx04121
]
107709671 (dcaf13)
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
Other 90S particles
107709671 (dcaf13)
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107709671 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
eIF2A
ANAPC4_WD40
KNTC1_N
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107709671
NCBI-ProteinID:
XP_016369745
UniProt:
A0A673JA41
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVA
SLDGHRDGISCITKHAKSLSTVISGACDGEVKLWNLPRQECLRTVQAHEGFVRGICSRFC
GTSFFTVGDDKTIKQWNLEAPGYGVREEPINTILGKAVFTGIDHHQRESTFVTCGQTVDI
WDEQRSSPIRSFSWGVDSFSCVRYNPVETELLASCASDRSIVLYDTRESAPLRKVIMQLR
SNTLCWNPMEAYYFTCANEDYNLYTYDIRHLDVPVTVHMDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKDKGHSREVYHTKRMQHVICVRWSADNKYVLSGSDEMNIRLWKANASEKL
GLLSTREKAAAHYNKKLIEKFQHHPQVRRIARHRHLPGDILKQKREQREMKEARRRREQN
VRKHSKPGSVPLLTEKEKHVAAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttgtagaaacccggacgattatgttcgagagacgactagagat
atacaacgagtgcccaggaactatgacccgaccctgcatccttttgaggtgcccagggaa
tacaccagggccctaaatgccaccaaactggagagggtgtttgccaaaccttttgtagct
tcactagatggtcacagagatggcatcagctgcatcaccaaacacgccaaaagcctttca
acagtcatatctggtgcctgcgatggggaggtgaaactgtggaaccttcctaggcaggag
tgtttgaggaccgttcaggctcatgaaggatttgtacgaggaatctgttcccgcttttgt
ggcacttcctttttcacggtaggagatgacaagaccatcaaacaatggaacttggaggca
ccaggatatggagttcgggaggaaccaattaacacgattctggggaaggcggtgttcact
ggcattgaccaccaccagagggagagcacgtttgtaacctgcgggcagactgtggatatc
tgggatgagcagagaagcagtcccatccgctccttcagctggggtgtggacagcttcagc
tgcgtccgctacaaccctgtggagaccgaacttctcgctagctgcgcatcagacagaagt
atcgtcttgtatgacaccagagaatctgcaccgcttagaaaggttattatgcaattgaga
agcaatacgctttgctggaacccaatggaagcatattattttacctgcgccaacgaagac
tacaacctttatacttacgatataaggcatctggatgttcctgtgactgtgcacatggat
catgtatccgctgtgctggatgttgattattcacctacaggaagggagtttgtatctgcc
agctttgacaaaaccatccgaatctttccaaaagacaaaggccacagcagggaggtgtac
cacaccaaacgtatgcagcatgtcatctgtgtgagatggtccgctgacaacaaatacgtc
ctgagcggctccgacgagatgaacattcggctgtggaaggccaacgcctcggagaagctt
ggactgctctccacccgagaaaaagctgccgcacactacaacaagaagctgatagagaaa
tttcagcaccatccacaggtgagacgcatcgcccgtcaccgccacctgcctggagacatc
ctgaagcagaagagagagcagcgggaaatgaaggaagcccggcgcaggagggaacaaaac
gtccgcaagcacagcaagccggggtctgttcccctgctgacagaaaaggagaaacatgtg
gcggctgttgtggagtaa
DBGET
integrated database retrieval system
