Sinocyclocheilus rhinocerous: 107709804
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Entry
107709804 CDS
T04916
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03440
Homologous recombination
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107709804
03460 Fanconi anemia pathway
107709804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srx03032
]
107709804
03400 DNA repair and recombination proteins [BR:
srx03400
]
107709804
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107709804
DNA replication proteins [BR:
srx03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107709804
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107709804
Bloom's syndrome complex (BTR)
107709804
FA (Fanconi anemia) pathway
107709804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
Syntaxin
Motif
Other DBs
NCBI-GeneID:
107709804
NCBI-ProteinID:
XP_016369909
UniProt:
A0A673L784
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MPSLPQNNLKEQLERHNNAAQNKLSLLKLKPGGFCFKKSSSGISKVEVPQKVTGANVLAN
RSVNISRSCEVTKTPVTFSQKPKRAAPKVNFFAAPSRPKTNTVNPLVNPFAVNKTPPVQF
TIKDLAKYAALPKDQTVGEPKCDISQLSFNEWDDLDDFETPVKARVPSPVTEPSTKKLSV
SDQNTSPNSSCAKSDETTLNGGSQVTESITTPKDILSAANRVSTEPAEREPEDSPIKKSK
RHKKSVQQKALLSDTEEEEIIDCITPDKNEKDIKCVTTAAEEQWAETNIIDIDETETDNF
YEDFIPPSPVLEETSPFDSEEEKSSSDPVTHADKNVPPHESASNLSAPCDEPAKELKGPD
DALLTIMESICYLVDTIPEHELIALTCGTELLLQRAHRKRILANGAPSRTSQLGPAATPY
SSLLNRQGFGVTPSSLTSSMTPVTSEKAVKTGFPFRKSIASVISLENDSVFEDSDCIING
VETPGGSWNPNSTAKTATSRDISNRSSPPSSKYVSKTDKCYSRLSFNESNNQTVGGDQVD
LFYSPKRVESGKRNTESSVETNMEVPNCSRADTETLDDFLIDDFDIDDFDETDVPEYFEE
PPSVLASRDRFDAKTPSVREGGPSKPLERKTATPPALKPTKTLNTEPVYRNPAHDRFRGF
SFPHSPEMMKIFHKKFGLHQFRFSQLEAINASLLGEDTFVLMPTGGGKSLCYQLPACVFA
GVTVVISPLRSLIVDQVQKLTTLDICATSLSGDKKDSEAAKIYMQLSRKDPPIKLLYATP
EKVCASGRMISALQNLYERGLLARFVIDEAHCVSQWGHDFRPDYKRLHELRRMFPNVPIM
ALTATATPRVQKDILNQLAMTRPQVFTMSFNRHNLKYSVLPKKPKKVDEECIQWIKKYYP
RDSGIVYCLSRNDCDTLADSLQRAGIAALAYHAGLSDREYVQNKWINQDGCQVMCATIAF
GMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYSYSDVIRIKRLIAMDK
DGSQQSKATHISNLHSMVHFCENVAECRRIQLLAYFGEHTFNTSFCKEHPEVICDNCARP
HKYKSRNVTDDVKKIVRFVQENCEKVGNRYGKSAQQNRLTLNMLVDIFLGSKSARIQSGM
FGVGAAYSKHNAERLFKKLVLDSVLMEDLYITNKGQAVAYISAGLKAMSVLSGCMQVEFV
ETETASSIRKHKASVIENVSKREEMVKKCLQELNDLCKKLGKVFGIHYYNIFSTATLKKI
AETLSSDPEVLLQIDGVTEDKLEKYGAEVIELLQKYSEWQLPAEAQTESSGWIDKTRGHQ
NEEDDDDEGDTTSTYFRSTSGRGAKRKQGSYSRKPKRRKGASGQNSSSKGGYSNNWSSSR
GGGGRGGYRGGNRSAGRGSRPAPSVPAVKRPGFMALPTPQTAARPFLKPTFSHL
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcttcctcaaaacaacctaaaggagcaactggaacgacacaataatgctgca
cagaacaagttgtcactgctgaaactaaagcctggggggttttgtttcaaaaagtcttca
tcaggtatctccaaagtggaagttcctcaaaaggtaactggtgcaaatgtcttagcaaac
aggagtgtcaatatttcccgcagctgtgaagtaaccaaaactcctgtgacgttttcgcaa
aagcctaagagagcagctccgaaagtcaacttcttcgctgcacccagcagaccgaagaca
aatactgttaatccattagtcaacccgtttgctgtgaacaaaacacctcctgtccaattt
accattaaggatttggcaaaatatgcagccttacctaaggatcaaactgtgggtgaacct
aagtgtgacatctcccaactctccttcaatgaatgggatgacttggatgattttgaaacc
ccagtcaaggcaagagtaccgtccccagttacagaaccctctacaaaaaagctaagtgta
tcggaccagaacacgtccccaaattcctcttgtgctaagagtgatgagactacattaaat
ggaggttcacaggttacagaatctataactaccccaaaggacatcctgtcagctgctaat
agagtcagcacagagcctgctgagagagagccagaggactcgcccattaaaaaatccaaa
agacataagaaatcagtccagcaaaaggcgttacttagtgacactgaagaagaggagatc
attgactgtattacaccagataaaaatgaaaaggacatcaagtgtgtgacaactgcggca
gaagagcagtgggctgagacaaacatcatagacattgatgagactgagacagacaacttt
tatgaggatttcatccccccatcccctgttcttgaggagacgagtccctttgactcagaa
gaggagaaaagttcatctgaccctgttacacatgctgacaaaaatgttccacctcatgag
tctgcctcaaacctgtcagcaccctgtgatgaacctgctaaagaattaaaaggacctgat
gatgctctccttactattatggagtctatttgttatctagtggacactattccagagcat
gagctcatagcactgacctgcggcacagagctattactgcagagagcacacaggaaaagg
attcttgctaatggtgcaccatctagaacatctcagttaggcccagcagcaactccatat
tctagtctgctaaacagacaagggtttggagtcacgccctctagtctaacatcatctatg
accccagtgacatcagaaaaggctgtcaaaacaggctttccatttcgcaagtccattgcc
tcagtcatatctttggaaaatgacagtgtgtttgaggattctgactgcatcatcaatggg
gttgagacccctggtggttcctggaatcctaacagcaccgcaaaaacagcaactagtagg
gacatctcaaacaggtcaagtcccccttcaagcaaatatgtgtcaaaaacagataagtgc
tactcaaggttgtccttcaatgagtcaaacaatcagactgtgggtggagatcaggttgac
ttgttttattcccccaaaagagtagaatcaggaaagagaaatactgagagcagtgttgaa
accaacatggaagtacccaactgttctcgagcagatacagagacacttgatgacttccta
attgatgactttgatattgatgattttgatgagactgatgttccagaatattttgaagaa
cctccaagtgtcttggcatcaagagaccgctttgatgcaaaaacgccatcagtgcgggag
ggagggccttcaaaacctttggagagaaagactgcaacaccaccagcactaaaacctacc
aaaacattaaacactgaacctgtgtacagaaacccagctcatgaccgctttagaggcttc
agctttcctcacagcccagagatgatgaagatcttccataagaagtttgggctgcatcag
ttccgcttcagtcagctggaggctattaatgcctcactgttaggagaagacacgtttgta
ctgatgcctacaggtggtggtaaaagtctctgctatcagcttcctgcttgtgtctttgct
ggagtgactgttgtcatttctcctctgcggtctctcatagttgaccaggtccaaaagctt
accacattagatatctgtgcaactagtttatctggggacaaaaaagatagtgaggctgca
aagatctatatgcagctgtctaggaaggatccccccatcaaactgctttatgccactcct
gagaaggtgtgtgcaagtggacggatgatcagtgcccttcagaatctgtatgaaaggggt
ctgctggctcgctttgtcattgacgaggcccattgtgtcagtcagtggggtcatgacttc
aggccagactacaagcgcttacatgagctcaggcggatgtttcccaatgttcctataatg
gcactgacggccacagccactcctagagttcagaaagacattctgaaccagctggcaatg
acccgtcctcaggtattcactatgagcttcaacaggcacaatctcaaatattcagttttg
ccaaaaaagcccaagaaggttgatgaggaatgtattcagtggatcaagaaatattaccca
cgtgactcgggaattgtgtactgcttgtctcgtaatgactgcgacactctggctgacagt
ctgcagagggctgggatcgcagcgctggcttatcacgctggcctgagtgacagggaatat
gtccagaataaatggatcaaccaggatggctgccaggttatgtgtgccaccattgcattt
ggcatgggaatcgataagccagatgtgcgttatgtgatccatgccagtttgcccaagtca
gtggagggttattaccaggagtcaggcagagctggtcgagatggagagatttcccactgc
gtcctcttctattcctacagtgatgttatccgcatcaagagactcattgctatggataaa
gacggcagccagcaatccaaagccacccacatcagcaacctgcacagcatggtgcatttc
tgtgagaatgtggccgagtgcaggagaatccagttgctggcttacttcggcgagcacaca
ttcaatacaagcttctgtaaagagcatcctgaggtcatctgtgacaattgtgccagacca
cataaatataaatcaagaaatgtcactgatgatgtgaagaagattgtgaggtttgtgcag
gagaactgtgagaaggttggaaacagatatggcaaatccgcccagcagaacaggctcact
ctcaacatgctggtcgacatatttcttggctccaaaagtgctcggatccagtctggaatg
ttcggagtaggagcagcatattccaaacacaatgctgagaggctttttaagaaactggtg
ctggatagtgttctgatggaggacctctacatcactaacaaagggcaggcagtggcctat
atctctgctgggcttaaagccatgagtgtactgagtggttgcatgcaggttgagtttgtt
gagacggagactgcgtccagcatcagaaagcacaaagcctctgtgattgagaacgtttct
aagagagaggagatggttaaaaaatgtctacaggaactcaatgatctgtgcaagaagttg
ggcaaagtcttcggcattcattactacaacattttctccacagccacactcaaaaagatt
gctgaaactctctcgtctgatccggaggttctgctgcagattgatggtgtgaccgaagac
aagctggagaagtatggagctgaggttattgaactgctgcagaagtactccgagtggcag
ctgcctgctgaggcacagacagagagttcaggatggattgacaaaacaagaggccatcaa
aacgaggaagatgacgatgatgaaggggacaccacatcaacctatttcagaagcacctct
ggacgaggagcaaagagaaagcaagggtcttactccaggaaacccaaaagaagaaaaggt
gccagtggccaaaactcctcctctaaaggtggatacagcaataactggtcttcatcaaga
ggaggaggaggaagagggggatacaggggtggtaatcgaagtgcaggcagaggttccagg
ccggctccatcagtcccagcagtgaagaggcccggcttcatggctttgcccaccccacag
actgctgctcgtccattcctcaaaccaacattctctcacctctag
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integrated database retrieval system
