Sinocyclocheilus rhinocerous: 107710004
Help
Entry
107710004 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107710004
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107710004
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
U-box type E3
107710004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-CCHC
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
SR-25
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Siva
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107710004
NCBI-ProteinID:
XP_016370166
LinkDB
All DBs
Position
Unknown
AA seq
1783 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGLKSTSKTFVIDRFEPSGSSKAIDDSSSISLALLSKTANLAE
TNASEEDKIKAMMSQSNHDYDPIHYAKKLVGPPPPNYTCFRCGKTGHYIRNCPTNGQDRS
FEAPQRIKKSTGIPRSFMVEVDDPNRKGVMLTNSGIYAIPTIDAEAYAIGKKEKPPFLPQ
TQSSSSDEEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTCLLESDEHVCPTCKQ
SDVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAAHQAAAQGAQTQAPAQRPPMRLAT
SRQQDPLMANVPSSAADSTPPQSTLAAPLSPVSTHQPSSTPPSSSSSTVNSSSAPAASNY
SPVVNSPQHSTKQDDPPSSKEPEVPASIVVPSSDTAAPTTSIPKGYHVPVIGKPNMPQHH
MHRSGQPRASGPRPSGSRPAWDPSSSRGRAPSERPPRTQPPPVQNLPPVIPPVYVPPALF
PPPPHPMPQPPGGVPQQYPIQYPPGQQPPPPYNIPPPVFPPVPPNVTAPWVPPCAQPPIA
NPISTMPAAPFLSKEEFYRQQRRLKEDSQCRFVTREKKSKLEEFTNDFAKELLEYRKIQK
ERRRSYSRSKSPYRDSSYSGSSYSYSKSRSRSRSPRSYSRSVSRSRSRSRSRSRSRSRSY
SRSPYSRRGRGRSRSYRSRSRTPTYHRSRSRSPSYRGREMSGMGSGIYRSRSRSPLYRNH
SPSKKLPPPSQIEGERKYAGRYRELPPYDPKEYYGRNIDQSDPYERERYREWEREYREWY
DKYFKNYNNPPSSQMRGRAPGSREPYTPERFAPPRPRENSPYSRGRREDYPPPPQSHGVP
PRSRGSMTYQEKCAEKYGHLHVNTTGAGRGLNKEFLKPLKDREPGGSTAADPKSMKHKKH
RKKKREDSDLFSHSDSMDESRKDDRKEDSMLMNSSRDDATPVRDEPMDSSTVPYKTTPVK
EKKERSKSKTDKVKRKSENSGQKKEASGKMSKPAREKESDAPREKVAPTEPAIKRVKDEP
SHKSEPSKPQSSESKLMLPRKLMQSRPIKHHQEVKPIKDELKSKKELVKDPVKPDKIPVK
DGKVPKKEPEKPVKTEEKMPAKTVDTKQDKKKRKDDKPPVKDLDVPPVKVAKIEVDVAKS
SPKPKPRLESERPVEKEKVAIPSLMDMKPEPVRKIKINREIGKRISSIDRPLSAEDSAHA
TGKGRLDKSRRKLRRKVHAPDGSGSILVDYTSTSSTGGSPIKKHEDKLDLKKTVVKTLEE
YTNDSSTPAEDEIVMIQVPRSKWEKEDYESEDDESKVATRTGSINTSSSAPSGENTAVKS
ASKESPHADKAPPVSKEADVKPAKDSTSGDKEKDTDKEKDREQERDSGKEKDRSSTADRE
AADKRKPSVPNQERERAQEKGSDHGSERSSSSQSSRDRQADRPEPTSRKPAGKETTPGVP
SRKTENRDDARDHLGTRSKDERNPIRRRVSPSPPPRVKDLHTDSGRKTLEAPQESQSPSR
NKRVSSQNAPEPKRTGPEDHKGDWPCSKESQGSRHSDVRNAKDREHRTPHRALTPDPRTD
AEKGGAHGDHIKIPSARSTRLSSDLARETDEAAFVPDYSESDSETSDIESKMEQRGRERD
SSGSQSPSPSGSHGHSSSPSSPGSQDSKKKKKDKKEKKEKKKHKKHKKHKKHKKHTSNES
ESELKGQKHKHKKKKSKKSKDKDKDDKEKDESERDEHKAKVSV
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtccattacaagttttcttctaaacttaactacgacacggtcaccttcgac
ggccttcatatcacgctcagtgatttgaaacgccagatcatggggcgagaaaagctgaag
gccgcggattgcgacctgcaaatcaccaatgctcagactaaagaagaatacactgatgat
ggagccctcatccctaaaaactcgtctgtcatcatcagacgaatccctattggagggctg
aagtccacaagcaaaacatttgtcatcgatcgatttgaaccaagtggatcttcaaaagca
attgatgattcttcatccatttcactggccctgctttcaaagacagccaatcttgctgaa
acaaatgcatcagaggaagacaaaataaaagcaatgatgtctcagtccaaccatgactat
gacccaatccattatgcaaagaagcttgttggtccgcctcccccaaactacacatgcttt
cgttgtggaaaaactggacattatatccgaaactgcccaaccaatgggcaggatcgaagt
tttgaagctccccaacggataaagaaaagcacaggaattcctcggagtttcatggtggag
gttgatgatccaaacagaaagggagtcatgttgaccaacagtggaatatatgccattcct
actattgatgctgaggcctatgccattgggaagaaagagaagccaccattcttgccccaa
actcaatcttcatcctcagatgaagaagatccagtgcctgacgagctgctctgtttgatc
tgcaaggatcttatgacagatgctgtggttatcccctgctgtggaaatagctactgtgat
gagtgtattcgaacgtgtttgctggagtctgatgaacatgtttgcccaacctgcaaacaa
tctgatgtatctcctgatgcactgatcgcaaacaaattcttgcgccaagcagtgaataat
tttaggaatgaaactggatataccaagaggattcgaaaagctgcagctgctcatcaagca
gctgcacaaggagcccaaacacaagctcctgcccagcggccacctatgagactggcaacc
tcacgccagcaggaccctctgatggccaatgttccaagctcagcagctgatagcacccct
ccccaaagcacacttgctgcccctttatctcctgttagcactcatcagccctccagcacc
ccaccttcttctagcagctccactgtaaacagcagcagtgcacctgcagcatcgaactat
agccctgtggtgaactctcctcagcactctactaagcaggatgaccctccttcatctaag
gaaccagaggtcccagcatctattgttgtgccttcatcagacactgctgccccaacaact
tccattccgaagggataccatgtcccagtaattgggaagccaaatatgcctcagcatcac
atgcatagatcagggcagccaagggctagtggaccaaggccgtctggaagccgtcctgca
tgggatccgtcctcaagtagagggagagctcctagtgagcgaccaccaagaacacagcct
cccccagtacaaaaccttcctcctgtaatccctccagtgtatgtgcctcctgctcttttt
cctcctcctccacatcctatgcctcagccacctggtggtgttccacagcagtatcccata
cagtatcctccaggacaacagcctccccctccctacaacattccgccacctgtatttcca
cctgtcccaccaaatgtgaccgctccatgggtgcctccttgtgcacagccacctatagcc
aaccccatctctactatgccagcagcaccttttctatccaaggaggagttttaccgtcaa
cagcgtagactgaaggaagattcccaatgtcgattcgttaccagggagaagaagtccaaa
cttgaggaatttactaatgactttgccaaagagcttttggagtacagaaagatccagaag
gagagaaggcgatcctactctaggtcaaaatctccttacagggattcctcctacagtggc
tcatcatattcgtattccaaatcccgctctcggtccagatcaccacgctcctactctcgg
tcagtttcccgatctcggtcaagatcccgctcacgctctcgttcgcgatcacgctcctac
tctcgctcaccatactcccgcaggggccgaggtcgaagccgtagctatcgatctaggtca
cgcactccaacataccatcgctcccgcagtagatcaccatcatatagaggtcgggagatg
agtggaatgggaagtgggatctatcgttcccgctctagatccccactatataggaatcac
agtcccagcaagaaactcccacccccttctcaaattgagggtgagcgcaaatatgcaggg
aggtacagagagctccctccttatgatcctaaggaatattatggccgcaacatagaccaa
agtgacccctatgagagagagcgatatcgagagtgggaaagagagtacagggagtggtac
gataaatacttcaagaactacaacaacccaccaagtagtcaaatgcgaggccgtgctcca
ggcagcagggaaccctatactcctgagcgttttgctcctccccgaccaagagaaaactcc
ccctacagcagggggcgtcgggaggattatccaccaccacctcagagccacggcgtccca
ccaagaagcagaggttccatgacataccaagagaagtgtgctgagaagtatggccacctt
catgtcaacaccactggagcaggaagaggacttaacaaagagtttttgaaacctcttaag
gaccgagaacccggtggcagcactgctgcagaccccaagtctatgaagcataaaaaacat
cgcaaaaagaagagagaagatagtgacctcttcagtcactctgactctatggatgaatcc
aggaaagatgatcgtaaagaggattccatgctgatgaattcaagtcgtgatgatgccaca
cctgtcagggatgagcccatggatagctctacagtgccctacaagacaactcctgtaaag
gagaagaaagagaggtcaaaaagcaaaactgacaaagttaaacgaaagtctgaaaacagt
gggcagaagaaggaagcatcaggaaagatgtcaaaacctgctagagagaaagaatctgat
gcaccacgagagaaagtggctcccactgaaccagccattaagagagtcaaagacgaacca
tcccacaaatctgaaccaagcaaacctcaatcctcagagtccaaactcatgctcccacgc
aagttgatgcagtctaggcccatcaaacaccatcaggaggtaaagcccatcaaagatgag
ctcaaaagcaagaaagaattggtgaaagatcctgtaaagccagataaaattcctgtcaaa
gatgggaaggtccccaaaaaagagccagagaagcctgtgaaaactgaggagaagatgcct
gctaagacagttgatactaaacaagataagaagaaacggaaagatgacaagccacctgtg
aaagacctagatgttcctccagtaaaagtagcaaaaatagaagttgacgtggctaaaagc
tctccaaaacctaaacccagactggagagcgaaaggcctgttgaaaaggagaaagtagct
attccgtctctgatggacatgaagccagagcctgtaagaaagattaaaatcaacagggaa
attggcaagagaatttctagcattgatcggccactttcagctgaggactctgctcatgcc
acaggaaagggcagactggacaagtctagaagaaaattgaggaggaaggttcatgctccc
gatgggtcagggtccatattggttgattacaccagcaccagttctacaggtggaagcccc
atcaaaaagcatgaagacaagcttgacctaaagaagactgtggtgaagaccctggaggaa
tataccaatgacagctccacccctgctgaggatgaaattgtcatgatccaggtgccccgt
tccaagtgggaaaaggaggactatgaatctgaggacgatgaatctaaggttgccacccga
acaggcagcatcaacacatccagctctgctccttcaggggagaacactgcagtgaaatca
gctagcaaggagtctccacatgctgacaaagctccgccagtctccaaagaggcagacgtc
aaacctgccaaggactccacatctggcgataaggagaaagatactgacaaggagaaagac
cgagagcaagaacgagacagtgggaaagaaaaagaccgcagcagcactgcagatcgtgag
gcagctgataaaaggaaacctagtgtacctaatcaggaaagagagcgtgcacaggagaag
ggcagtgaccatggcagtgaacgaagctcttcttcccagtcctccagagataggcaagct
gacaggcctgaacctacctctagaaaaccagcaggaaaggagacgactccaggcgtcccc
agtagaaaaacagaaaatagagatgatgcaagagaccacttaggcactagatcaaaagat
gagagaaatccaatcaggaggagagtatcgccctccccgcccccaagggtaaaggactta
cacacagactctggaagaaaaactcttgaagcaccccaggagtcacaaagtccaagtagg
aataagagagtatcatcgcagaatgccccagagccaaaacgaacagggccagaggaccac
aaaggagactggccatgcagtaaggagagccagggttctaggcattctgatgtacgtaac
gcaaaagaccgggaacacaggactcctcatagagctttgactccagatcctaggactgat
gcagagaaaggtggcgcacatggcgaccacatcaaaatcccatctgcacgctccacgaga
ctgtcctcagatttagcacgggaaacagacgaggctgcgtttgtccctgactacagcgaa
agcgacagcgagacctcagacattgagagcaaaatggagcagagagggcgagagagggac
agcagtggcagccagagtccgagcccatctggcagccacggacacagcagcagccccagc
tctcccggcagtcaggacagcaaaaagaagaaaaaggacaaaaaggagaagaaggaaaag
aagaaacacaagaagcacaaaaaacacaaaaagcataagaaacatacgagcaatgagtct
gaatcagagctcaaaggacagaaacacaaacataagaaaaagaagtctaaaaagagcaag
gacaaagacaaagatgacaaagaaaaagatgagagtgagagagacgaacataaggcaaaa
gtatctgtttaa
DBGET
integrated database retrieval system
