Sinocyclocheilus rhinocerous: 107710154
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Entry
107710154 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107710154
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107710154
Spliceosome [BR:
srx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107710154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107710154
NCBI-ProteinID:
XP_016370369
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MRGSSSYGDRDRDRGRDRGPRFGSSRVAPPPPKKFGNPGDRLRKKKWDMDQLPKFEKNFY
SEHPEVHQMTFSAIARECLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIR
DLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPD
RQTLMWSATWPKEVRQLAEDFLHDYVQINIGALELSANHNILQIVDVCMENEKDTKLIQL
MEEIMAEKENKTIIFVETKKRCDELTQRMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKA
PILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQ
ARDLVRVLEEARQAINPKLLQLVDTCRGGGGGGRMRYRGNNSTSNNPNLMYQDECDRHMR
SVTGSNKGSRSNNLSRDGRSGGSSRDDRMSSSSYRDRSRDGRNNYNSGPPYNSGGGDQFQ
SCGGGGGGQYGSRGGGSHPGGGAGGQDQAGPPQGLFGAPPPTPQPGPGLQPLMAQQFPPP
PQPIMGFMGPGPYPFASPPPPIPPPPRK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagttcctcatatggagaccgagacagagatcgaggacgggacagggggcct
cgctttggatccagtcgagttgccccacctccacccaagaagtttgggaatccaggagat
cggctgaggaagaagaaatgggacatggaccagctacccaagtttgagaagaacttctac
agtgaacacccagaggttcatcagatgaccttttcagccattgcacgagaatgtcttgtg
ttggcaccgacgcgtgaattagcccagcaggtgcagcaagtggcttatgactatggcaaa
tcatctcggatcaagagtacctgtgtttatggtggagcccctaagggtccacagatccga
gatttagaaagaggtgttgaaatctgcattgccacacctggccgtctgatcgatttcctg
gaggcaggaaaaaccaacctgcgccgttgcacctacctagtgctggatgaggctgatcgt
atgttggacatgggatttgaaccccaaatccgcaaaattgttgaccaaattagacctgac
agacagactctcatgtggagtgctacctggcctaaagaagtgcgtcagctggctgaagat
ttcctccatgactatgtccaaatcaatataggagctctagaactgagcgcaaaccacaac
atcctgcagatagtggacgtctgcatggagaatgaaaaagacaccaagctgattcagctg
atggaggaaatcatggctgaaaaggagaacaaaaccatcatctttgtcgagacaaagaaa
cgttgtgatgaacttactcagaggatgcgaagagatgggtggcctgcaatgtgtattcat
ggtgacaagagccaaccagagagggactgggtactatcagagttccgcagtggaaaagct
ccaattttgattgctactgacgttgcctcacggggtctggatgtggaggatgttaaattt
gtcatcaactatgactatccaaactcttctgaggattatgttcatcgcattgggcgcaca
gcccgcagcaccaacaaaggtacagcctataccttcttcacacctgggaaccttcggcag
gctcgtgatctggtccgggttcttgaggaggctagacaggccatcaaccccaaactactg
cagctggtggacacatgccgtgggggagggggaggtggaaggatgcgttatcgtggcaac
aactcaacctcaaataaccccaacctgatgtaccaggatgaatgtgatcgccacatgcgc
tctgtaaccggaagtaacaagggcagccgcagcaacaacttgagccgtgatggaaggtca
ggtgggagcagccgtgacgaccgtatgtcctcttcttcttacagagaccgcagcagggat
ggacgaaacaactacaactcgggacccccctacaacagtggaggaggtgaccaattccag
agctgtgggggcggaggaggggggcagtatggctccagagggggaggctcacatccaggt
gggggtgcaggagggcaagatcaggctggacctccccaaggtctgtttggagcacctcca
ccaactcctcagcctgggccaggtctgcaaccactcatggcacagcagttccctcctcca
ccacagcctatcatggggttcatgggtcctggcccatacccatttgcctcaccaccacca
cccattcctccccctcctagaaagtag
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