Sinocyclocheilus rhinocerous: 107710204
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Entry
107710204 CDS
T04916
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107710204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107710204
Membrane trafficking [BR:
srx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107710204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Clathrin
zf_RING_Vps8
TPR_VPS8_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_HPS5
EIF3I
WDR55
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
107710204
NCBI-ProteinID:
XP_016370430
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MAESPDSRSLVSASSQLNLMEIEAIDDKEFDIPQVDTPPTLESILNEPEEDDEPFILEDT
CLLNTENIDAHSCETSSLASSDSGDRTHLKRRRKAVETNATVHGSVLRRNLLKGISAQIV
SAADKVDAGLPTAITVSNVIAVGTSHGLTLVFGKDQNQALRLCLGTTATGAEYGAVSALS
INHDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDHPALAVCNDSGG
SVFELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAGPELKDHPITHYSLLAMASLTKI
LLIGLKPSLKVWMTFPYGKTDPASVPLLAWQFVAVQKTINPVLAFCRGDTIHFLLVKKDE
SGTIHVIKPRQLLLNCDLISLSWINPHTLVLMDSTEKLRVVDRPSQEELETVDMAELQLV
YNSSHFKSLATGGNVSQALALVGEKTCYQSVCSYAGQIMYLGTKCVHIMTLRNWRERVDH
LLKQEKFMEALSLAWSFHEGTAKAVLGLFADPAKRKGVVADKMVEILLQYVDRSLKKCPE
QGKIQLMEQHFQDMVPVTVDYCLLLQRTDLLFNQIYPRLVENSVARGVFLESLEPYILSE
RIGCLTAPVMRDLLSYFQENGMMDSVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVF
NSGMNDYISPMEKLFQAIGPPLREGKPLTDEHVVMGNKLLVYISCCLAGRAYPLGDIPED
LVPQVKNQVFEFLIRLHSVEAAQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQAL
EYQQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSP
DDDSRHTERQQVLLELLQVGGVVQFDEGHLLDLAEKTEFYQICEFMYEKKHLYDKIVDCY
LKDPLRKEELFNYIHNILSMPGYSSEEKQLVSVKALQHIKDLVSINSAKTAELVAVHFAD
KVQPIITSLQDDYLAFQFLKCLLNPSSRESLNPQTVLKLGPDLHELLVDLLCQFSPQQVI
AFLKTSQDYRLEEAIQITEKHKLHETTAYLLEKKGDVQGAFEVLLQTLKGKLHKLALEGS
ETDKPDGEEEETGDEVPSLIQRVEEALHDIIALCQRSSHGLNQQQREALWFPLLEAMMSP
QKLLKGADTKHTSEALKELTMKVLNSMSSFIAPPAIIQRILQDPVYGKGKLAEIQGLILG
MLETFNYEQTLLETTTNLLNSDLHWSLSHLHKAVSRGLHPRQDHCNICLQQYKRRQESEE
EIIIFRYTHI
NT seq
3811 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctccggacagtcgcagtcttgtttctgcgtcctcacagctcaatttaatg
gaaatagaggcgattgatgataaagagtttgacatccctcaagtggacacgcctccgacc
ctagagagcatcctgaatgagcctgaagaggacgatgagccattcattctggaggacacg
tgtcttttgaacacagagaacattgatgcccactcgtgtgaaacctcgtctctggccagc
tctgacagtggagaccgcacacacttaaagaggaggaggaaagccgtggaaactaatgct
acagtacatggatctgttcttagacgcaatctgctgaaaggcatctcggctcagatagta
tccgctgcggataaagttgatgctggcttgccaacggcaataactgtttcaaatgtgatc
gctgtagggacgtcacatggtctgaccttagtatttggaaaagaccagaaccaggctctg
cgtctctgtctgggcaccacagcgacaggagcggagtatggggcggtgtcagctctcagt
attaatcacgattgcacacgactgctttgtggctttgccaaaggacagatcaccatgtgg
gatctggccaatgggaagctgctccgcactatcactgacgcccatccacctggcactgcc
atactacatgtgaagttcactgaccacccggcgctagctgtgtgtaatgacagtggcgga
tctgtgtttgagctgtcattcaggagggtaatggggatgaggacatgtgaatccaggtgt
ttgttcagtggttctaaaggtgaggtttgctgtgttgagcctctacatgctggacctgaa
ctgaaagatcatcccattacccactactccctgctggccatggcctcactcaccaagatt
ctactgataggactgaagccttcactcaaagtatggatgacttttccctacggcaagacg
gatcctgccagtgttcccttgttggcttggcagtttgtggcagtccagaaaacaatcaac
cccgttctggccttctgtagaggagacaccatccacttcctgctggttaaaaaggatgag
tctggcaccatccatgtcatcaaaccgagacagcttctactcaactgtgacctcatcagt
ctgagctggataaacccccatacgcttgtgttaatggacagcacagagaagctgcgagtg
gtggacaggcccagtcaggaggaactggaaacggtggacatggccgagctgcagctggtt
tataacagcagccattttaaatccctcgctactggaggaaatgtcagccaagcactggct
ctagttggagagaagacatgttaccagtctgtttgcagctatgcaggccagatcatgtat
ctgggaacaaagtgtgtgcacatcatgaccctgaggaactggcgtgagcgtgtggaccat
ctgttgaaacaggagaagttcatggaggctctgtctcttgcctggtccttccacgagggc
accgccaaagctgtgctaggtctatttgcagaccctgctaagagaaaaggtgtggttgca
gacaagatggtggaaattttgttacagtatgtggatcgctctctgaaaaaatgtccagag
caagggaaaatccagctgatggagcaacacttccaggacatggttcccgtcacggtggat
tattgtctccttctgcagagaacggacctactgtttaaccagatctaccctcggctggtg
gagaactcagtggccaggggtgtgtttctggagagtctggagccttacattctgagcgag
aggattggttgtctgactgcacccgtcatgagagacctcctcagctacttccaggagaac
ggcatgatggatagtgtggagggatgcctggtccatatggacatcaccaatctggacata
cagcaggtggtgcagatgtgctgggataaccagctgtatgatgccatgatctacgtcttc
aacagtggcatgaatgactacatcagccccatggagaaactctttcaggcaattggtcct
cctctccgtgaaggaaagcctctcacagatgagcatgttgtgatgggaaataaactgctg
gtgtacatcagctgttgtttggcaggacgggcctatccgttaggtgacattcctgaagat
ctggtccctcaggtgaaaaaccaggtgtttgagtttctcattcgtctgcactcggtggag
gctgcacaggaagaggaagtgtatccatacattcgaactcttctgcacttcgacactcga
gagttcctcaacgtcctggcgctgacatttgaggacttcaagaatgacaaacaggctctg
gagtatcagcaaaggattgtggacattttactgaaggttatggtggacaattctgacttc
accccgtctcaggtcggctgtcttttcaccttcctggcacgacaacttgccaaacctgat
aataccctctttgttaaccggaagctgtttgaccaggttctagagtttctatgcagtcca
gatgatgactctagacatacagaaagacagcaggttctgctggagctgctgcaggttggt
ggcgtggtccagtttgatgaagggcatctccttgaccttgcagagaagacggaattttat
cagatctgcgagtttatgtatgaaaaaaagcacctttacgacaaaattgttgactgctac
ctgaaagaccctttgagaaaggaggagctcttcaactacattcataacatcctgtccatg
ccaggctacagctcagaggagaaacagttggtgtcggtcaaagcccttcaacacatcaag
gatctggtcagcattaactcagctaagacagcagagctagttgcagtgcactttgcagac
aaggtgcagcctatcatcacatctctgcaggacgactatttggcgttccagtttctgaag
tgcctcctgaaccccagctccagagagagtctgaatcctcagactgtcttgaagttgggt
ccagatcttcatgagctcttagtggacctactgtgccagttcagtcctcagcaggtcatc
gccttccttaagacctctcaggactaccgactggaggaggccattcagatcacagagaaa
cacaagctgcatgagaccacagcctacctgctggagaagaagggagatgtgcagggagct
tttgaagtgctgctacagaccctgaagggcaaactccacaaacttgccctggaaggctca
gagacagacaagcccgatggtgaggaggaggagacaggtgatgaagtgccgagtctgata
caaagagtggaggaagctctgcatgacatcattgctttgtgtcagaggagctcgcatggt
ctcaaccagcagcagagagaggctctgtggtttcctctcctcgaggcgatgatgtcacca
cagaaactactcaaaggagccgacaccaaacacacttcagaggcattaaaagagctcact
atgaaagtcttaaacagcatgtccagttttatcgctccacctgccatcattcagcgcatc
ctacaggaccctgtgtatgggaaaggaaagctggctgagattcagggactcattttaggg
atgctagaaaccttcaactatgaacagacattgttggagaccaccacaaatctgttgaac
tcagatcttcactggtctctgtcacacctgcataaggctgtcagtagagggcttcacccc
agacaggaccactgcaacatctgcttacagcagtacaagagacgccaggagagcgaggag
gagatcattatctttaggtacacacacatat
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